Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZUE entry

There are 2 chains in PDB entry 2ZUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2MET 629
B
 G 901 G 973
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 2ZUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 21Right-handed alpha
Helix 2
2
A
35 39Right-handed 310
Helix 3
3
A
44 54Right-handed alpha
Helix 4
4
A
56 69Right-handed alpha
Helix 5
5
A
91 107Right-handed alpha
Helix 6
6
A
108 110Right-handed 310
Helix 7
7
A
135 155Right-handed alpha
Helix 8
8
A
169 182Right-handed alpha
Helix 9
9
A
182 197Right-handed alpha
Helix 10
10
A
202 221Right-handed alpha
Helix 11
11
A
224 238Right-handed alpha
Helix 12
12
A
242 261Right-handed alpha
Helix 13
13
A
270 276Right-handed alpha
Helix 14
14
A
277 288Right-handed alpha
Helix 15
15
A
330 343Right-handed alpha
Helix 16
16
A
387 401Right-handed alpha
Helix 17
17
A
403 409Right-handed alpha
Helix 18
18
A
436 456Right-handed alpha
Helix 19
19
A
460 482Right-handed alpha
Helix 20
20
A
492 497Right-handed alpha
Helix 21
21
A
503 524Right-handed alpha
Helix 22
22
A
529 537Right-handed alpha
Helix 23
23
A
543 566Right-handed alpha
Helix 24
24
A
569 590Right-handed alpha
Helix 25
25
A
598 621Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2ZUE. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
41 43anti-parallel
Strand 3
A
85 90anti-parallel
Strand 4
A
76 82anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
351 354anti-parallel
Strand 3
A
360 362anti-parallel
Strand 4
A
266 269parallel
Strand 5
A
158 165parallel
Strand 6
A
120 124parallel
Strand 7
A
378 384parallel
Strand 8
A
410 415parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
304 307anti-parallel
Strand 3
A
319 323anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
489 490parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il