Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZVB entry

There is 1 chain in PDB entry 2ZVB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLY 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 2ZVB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
18 28Right-handed alpha
Helix 3
3
A
34 45Right-handed alpha
Helix 4
4
A
59 73Right-handed alpha
Helix 5
5
A
90 101Right-handed alpha
Helix 6
6
A
132 140Right-handed alpha
Helix 7
7
A
160 174Right-handed alpha
Helix 8
8
A
190 200Right-handed alpha
Helix 9
9
A
228 233Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 2ZVB. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
30 32parallel
Strand 3
A
76 81parallel
Strand 4
A
3 8parallel
Strand 5
A
121 128parallel
Strand 6
A
114 118anti-parallel
Strand 7
A
104 105anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
254 256parallel
Strand 3
A
249 251anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
177 181parallel
Strand 3
A
239 243anti-parallel
Strand 4
A
208 213anti-parallel
Strand 5
A
221 226anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il