Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZVI entry

There are 4 chains in PDB entry 2ZVI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11LYS 410
B
 SER 11ALA 411
C
 SER 11GLY 409
D
 SER 11ALA 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 2ZVI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 37Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
52 57Right-handed 310
Helix 4
4
A
85 87Right-handed 310
Helix 5
5
A
90 100Right-handed alpha
Helix 6
6
A
101 105Right-handed 310
Helix 7
7
A
116 122Right-handed alpha
Helix 8
8
A
128 138Right-handed alpha
Helix 9
9
A
156 170Right-handed alpha
Helix 10
10
A
188 208Right-handed alpha
Helix 11
11
A
220 222Right-handed 310
Helix 12
12
A
223 234Right-handed alpha
Helix 13
13
A
242 246Right-handed 310
Helix 14
14
A
247 257Right-handed alpha
Helix 15
15
A
270 275Right-handed 310
Helix 16
16
A
283 288Right-handed alpha
Helix 17
17
A
289 295Right-handed alpha
Helix 18
18
A
312 325Right-handed alpha
Helix 19
19
A
341 343Right-handed 310
Helix 20
20
A
344 353Right-handed alpha
Helix 21
21
A
361 367Right-handed 310
Helix 22
22
A
369 387Right-handed alpha
Helix 23
23
A
390 398Right-handed alpha
Helix 24
24
A
398 409Right-handed alpha
Helix 25
25
B
25 37Right-handed alpha
Helix 26
26
B
49 54Right-handed alpha
Helix 27
27
B
55 57Right-handed 310
Helix 28
28
B
85 87Right-handed 310
Helix 29
29
B
90 100Right-handed alpha
Helix 30
30
B
101 105Right-handed 310
Helix 31
31
B
116 122Right-handed alpha
Helix 32
32
B
128 138Right-handed alpha
Helix 33
33
B
156 170Right-handed alpha
Helix 34
34
B
188 208Right-handed alpha
Helix 35
35
B
220 222Right-handed 310
Helix 36
36
B
223 235Right-handed alpha
Helix 37
37
B
242 246Right-handed 310
Helix 38
38
B
247 257Right-handed alpha
Helix 39
39
B
271 276Right-handed alpha
Helix 40
40
B
283 288Right-handed alpha
Helix 41
41
B
289 295Right-handed alpha
Helix 42
42
B
312 325Right-handed alpha
Helix 43
43
B
341 343Right-handed 310
Helix 44
44
B
344 353Right-handed alpha
Helix 45
45
B
369 387Right-handed alpha
Helix 46
46
B
390 398Right-handed alpha
Helix 47
47
B
398 409Right-handed alpha
Helix 48
48
C
25 37Right-handed alpha
Helix 49
49
C
53 57Right-handed 310
Helix 50
50
C
85 87Right-handed 310
Helix 51
51
C
90 100Right-handed alpha
Helix 52
52
C
101 105Right-handed 310
Helix 53
53
C
116 121Right-handed alpha
Helix 54
54
C
128 138Right-handed alpha
Helix 55
55
C
156 170Right-handed alpha
Helix 56
56
C
188 206Right-handed alpha
Helix 57
57
C
220 222Right-handed 310
Helix 58
58
C
223 234Right-handed alpha
Helix 59
59
C
242 247Right-handed alpha
Helix 60
60
C
247 256Right-handed alpha
Helix 61
61
C
270 275Right-handed 310
Helix 62
62
C
283 288Right-handed alpha
Helix 63
63
C
289 295Right-handed alpha
Helix 64
64
C
312 325Right-handed alpha
Helix 65
65
C
341 343Right-handed 310
Helix 66
66
C
344 353Right-handed alpha
Helix 67
67
C
360 367Right-handed alpha
Helix 68
68
C
370 387Right-handed alpha
Helix 69
69
C
392 397Right-handed alpha
Helix 70
70
C
398 409Right-handed alpha
Helix 71
71
D
25 35Right-handed alpha
Helix 72
72
D
47 52Right-handed alpha
Helix 73
73
D
85 87Right-handed 310
Helix 74
74
D
90 100Right-handed alpha
Helix 75
75
D
101 105Right-handed 310
Helix 76
76
D
116 122Right-handed alpha
Helix 77
77
D
128 138Right-handed alpha
Helix 78
78
D
156 170Right-handed alpha
Helix 79
79
D
188 208Right-handed alpha
Helix 80
80
D
220 222Right-handed 310
Helix 81
81
D
223 235Right-handed alpha
Helix 82
82
D
242 247Right-handed alpha
Helix 83
83
D
247 257Right-handed alpha
Helix 84
84
D
271 276Right-handed alpha
Helix 85
85
D
283 289Right-handed alpha
Helix 86
86
D
289 295Right-handed alpha
Helix 87
87
D
312 325Right-handed alpha
Helix 88
88
D
341 343Right-handed 310
Helix 89
89
D
344 353Right-handed alpha
Helix 90
90
D
362 367Right-handed 310
Helix 91
91
D
369 388Right-handed alpha
Helix 92
92
D
390 398Right-handed alpha
Helix 93
93
D
398 409Right-handed alpha
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There are 8 sheets in PDB entry 2ZVI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
76 83anti-parallel
Strand 3
A
12 19anti-parallel
Strand 4
A
108 114anti-parallel
Strand 5
A
281 282parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 336first strand
Strand 2
A
299 302parallel
Strand 3
A
264 266parallel
Strand 4
A
238 241parallel
Strand 5
A
212 216parallel
Strand 6
A
174 176parallel
Strand 7
A
144 148parallel
Strand 8
A
357 359parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 65first strand
Strand 2
B
75 83anti-parallel
Strand 3
B
12 20anti-parallel
Strand 4
B
108 114anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 336first strand
Strand 2
B
299 302parallel
Strand 3
B
264 266parallel
Strand 4
B
238 241parallel
Strand 5
B
212 216parallel
Strand 6
B
174 176parallel
Strand 7
B
144 148parallel
Strand 8
B
357 359parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 64first strand
Strand 2
C
75 83anti-parallel
Strand 3
C
12 20anti-parallel
Strand 4
C
108 114anti-parallel
Strand 5
C
281 282parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 336first strand
Strand 2
C
299 302parallel
Strand 3
C
264 266parallel
Strand 4
C
238 241parallel
Strand 5
C
212 216parallel
Strand 6
C
174 176parallel
Strand 7
C
144 148parallel
Strand 8
C
357 359parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 64first strand
Strand 2
D
77 83anti-parallel
Strand 3
D
12 19anti-parallel
Strand 4
D
108 114anti-parallel
Strand 5
D
281 282parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
333 336first strand
Strand 2
D
299 302parallel
Strand 3
D
264 266parallel
Strand 4
D
238 241parallel
Strand 5
D
212 216parallel
Strand 6
D
174 176parallel
Strand 7
D
144 148parallel
Strand 8
D
357 359parallel
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