Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2ZVL entry

There are 12 chains in PDB entry 2ZVL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 255
U	LYS 862	LEU 872
B	MET 1	ILE 255
V	PRO 861	THR 873
C	MET 1	ILE 255
W	PRO 861	LEU 872
D	MET 1	ILE 255
X	LYS 862	PRO 871
E	MET 1	ILE 255
Y	PRO 861	THR 873
F	MET 1	ILE 255
Z	LYS 862	LEU 872

There are 38 helices in PDB entry 2ZVL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	9	23	Right-handed alpha
Helix 2	2	A	55	57	Right-handed 310
Helix 3	3	A	72	80	Right-handed alpha
Helix 4	4	A	141	153	Right-handed alpha
Helix 5	5	A	209	216	Right-handed alpha
Helix 6	6	A	217	222	Right-handed 310
Helix 7	7	B	9	21	Right-handed alpha
Helix 8	8	B	55	57	Right-handed 310
Helix 9	9	B	72	80	Right-handed alpha
Helix 10	10	B	141	153	Right-handed alpha
Helix 11	11	B	209	216	Right-handed alpha
Helix 12	12	B	217	222	Right-handed 310
Helix 13	13	V	865	869	Right-handed 310
Helix 14	14	C	8	21	Right-handed alpha
Helix 15	15	C	55	57	Right-handed 310
Helix 16	16	C	72	80	Right-handed alpha
Helix 17	17	C	141	155	Right-handed alpha
Helix 18	18	C	209	216	Right-handed alpha
Helix 19	19	C	217	222	Right-handed 310
Helix 20	20	D	9	23	Right-handed alpha
Helix 21	21	D	55	57	Right-handed 310
Helix 22	22	D	72	80	Right-handed alpha
Helix 23	23	D	141	153	Right-handed alpha
Helix 24	24	D	209	216	Right-handed alpha
Helix 25	25	D	217	222	Right-handed 310
Helix 26	26	X	864	868	Right-handed 310
Helix 27	27	E	9	20	Right-handed alpha
Helix 28	28	E	55	57	Right-handed 310
Helix 29	29	E	72	80	Right-handed alpha
Helix 30	30	E	141	152	Right-handed alpha
Helix 31	31	E	209	216	Right-handed alpha
Helix 32	32	E	217	222	Right-handed 310
Helix 33	33	F	8	21	Right-handed alpha
Helix 34	34	F	55	57	Right-handed 310
Helix 35	35	F	72	80	Right-handed alpha
Helix 36	36	F	141	152	Right-handed alpha
Helix 37	37	F	209	216	Right-handed alpha
Helix 38	38	F	217	222	Right-handed 310

There are 13 sheets in PDB entry 2ZVL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	62	first strand
Strand 2	A	2	6	anti-parallel
Strand 3	A	87	92	anti-parallel
Strand 4	A	98	104	anti-parallel
Strand 5	A	110	117	anti-parallel
Strand 6	B	176	183	anti-parallel
Strand 7	B	166	173	anti-parallel
Strand 8	B	157	163	anti-parallel
Strand 9	B	203	208	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	71	first strand
Strand 2	A	25	31	anti-parallel
Strand 3	A	34	40	anti-parallel
Strand 4	A	46	53	anti-parallel
Strand 5	A	245	251	anti-parallel
Strand 6	A	235	241	anti-parallel
Strand 7	A	224	229	anti-parallel
Strand 8	A	135	140	anti-parallel
Strand 9	A	196	198	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	U	870	871	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	208	first strand
Strand 2	A	157	162	anti-parallel
Strand 3	A	167	173	anti-parallel
Strand 4	A	176	182	anti-parallel
Strand 5	C	110	117	anti-parallel
Strand 6	C	98	104	anti-parallel
Strand 7	C	87	92	anti-parallel
Strand 8	C	2	6	anti-parallel
Strand 9	C	59	62	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	62	first strand
Strand 2	B	2	6	anti-parallel
Strand 3	B	87	92	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	110	117	anti-parallel
Strand 6	C	176	182	anti-parallel
Strand 7	C	167	172	anti-parallel
Strand 8	C	157	162	anti-parallel
Strand 9	C	203	208	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	71	first strand
Strand 2	B	25	31	anti-parallel
Strand 3	B	34	40	anti-parallel
Strand 4	B	46	53	anti-parallel
Strand 5	B	245	251	anti-parallel
Strand 6	B	235	241	anti-parallel
Strand 7	B	224	229	anti-parallel
Strand 8	B	135	140	anti-parallel
Strand 9	B	196	199	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	71	first strand
Strand 2	C	25	30	anti-parallel
Strand 3	C	34	40	anti-parallel
Strand 4	C	46	53	anti-parallel
Strand 5	C	245	251	anti-parallel
Strand 6	C	233	241	anti-parallel
Strand 7	C	224	230	anti-parallel
Strand 8	C	135	140	anti-parallel
Strand 9	C	196	199	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	62	first strand
Strand 2	D	2	6	anti-parallel
Strand 3	D	87	92	anti-parallel
Strand 4	D	98	104	anti-parallel
Strand 5	D	110	117	anti-parallel
Strand 6	E	176	183	anti-parallel
Strand 7	E	166	172	anti-parallel
Strand 8	E	157	163	anti-parallel
Strand 9	E	203	208	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	71	first strand
Strand 2	D	25	31	anti-parallel
Strand 3	D	34	40	anti-parallel
Strand 4	D	46	53	anti-parallel
Strand 5	D	245	251	anti-parallel
Strand 6	D	235	241	anti-parallel
Strand 7	D	224	229	anti-parallel
Strand 8	D	135	140	anti-parallel
Strand 9	D	196	199	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	208	first strand
Strand 2	D	157	162	anti-parallel
Strand 3	D	167	173	anti-parallel
Strand 4	D	176	182	anti-parallel
Strand 5	F	110	117	anti-parallel
Strand 6	F	98	104	anti-parallel
Strand 7	F	87	92	anti-parallel
Strand 8	F	2	6	anti-parallel
Strand 9	F	59	62	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	62	first strand
Strand 2	E	2	6	anti-parallel
Strand 3	E	87	92	anti-parallel
Strand 4	E	98	104	anti-parallel
Strand 5	E	110	117	anti-parallel
Strand 6	F	176	182	anti-parallel
Strand 7	F	166	173	anti-parallel
Strand 8	F	157	163	anti-parallel
Strand 9	F	204	208	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	71	first strand
Strand 2	E	25	31	anti-parallel
Strand 3	E	34	40	anti-parallel
Strand 4	E	46	53	anti-parallel
Strand 5	E	245	251	anti-parallel
Strand 6	E	235	241	anti-parallel
Strand 7	E	224	229	anti-parallel
Strand 8	E	135	140	anti-parallel
Strand 9	E	196	199	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	71	first strand
Strand 2	F	25	31	anti-parallel
Strand 3	F	34	40	anti-parallel
Strand 4	F	46	53	anti-parallel
Strand 5	F	245	251	anti-parallel
Strand 6	F	235	241	anti-parallel
Strand 7	F	224	229	anti-parallel
Strand 8	F	135	140	anti-parallel
Strand 9	F	196	199	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2ZVL

Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVL