Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZVQ entry

There is 1 chain in PDB entry 2ZVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 ASP 6SER 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2ZVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
21 27Right-handed alpha
Helix 2
2
X
27 33Right-handed alpha
Helix 3
3
X
50 63Right-handed alpha
Helix 4
4
X
68 72Right-handed 310
Helix 5
5
X
74 79Right-handed alpha
Helix 6
6
X
92 98Right-handed alpha
Helix 7
7
X
110 115Right-handed 310
Helix 8
8
X
116 121Right-handed alpha
Helix 9
9
X
131 146Right-handed alpha
Helix 10
10
X
154 164Right-handed alpha
Helix 11
11
X
171 183Right-handed alpha
Helix 12
12
X
193 199Right-handed alpha
Helix 13
13
X
199 211Right-handed alpha
Helix 14
14
X
216 227Right-handed alpha
Helix 15
15
X
228 235Right-handed alpha
Helix 16
16
X
263 268Right-handed alpha
Helix 17
17
X
269 285Right-handed alpha
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There are 3 sheets in PDB entry 2ZVQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
13 15first strand
Strand 2
X
18 20anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
104 107first strand
Strand 2
X
41 45parallel
Strand 3
X
124 129parallel
Strand 4
X
188 192parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
85 86first strand
Strand 2
X
90 91anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il