Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZYL entry

There is 1 chain in PDB entry 2ZYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14SER 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2ZYL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 36Right-handed 310
Helix 2
2
A
73 77Right-handed 310
Helix 3
3
A
138 142Right-handed 310
Helix 4
4
A
146 151Right-handed 310
Helix 5
5
A
168 179Right-handed 310
Helix 6
6
A
180 185Right-handed alpha
Helix 7
7
A
286 309Right-handed alpha
Helix 8
8
A
320 324Right-handed 310
Helix 9
9
A
325 335Right-handed alpha
Helix 10
10
A
336 338Right-handed 310
Helix 11
11
A
339 343Right-handed 310
Helix 12
12
A
344 349Right-handed alpha
Helix 13
13
A
357 373Right-handed alpha
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There are 4 sheets in PDB entry 2ZYL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 31first strand
Strand 2
A
125 130anti-parallel
Strand 3
A
119 122anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 45first strand
Strand 2
A
48 54anti-parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
116 117anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
83 85anti-parallel
Strand 3
A
92 94anti-parallel
Strand 4
A
99 101anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 165first strand
Strand 2
A
266 275anti-parallel
Strand 3
A
249 263anti-parallel
Strand 4
A
237 246anti-parallel
Strand 5
A
224 233anti-parallel
Strand 6
A
201 210anti-parallel
Strand 7
A
188 198anti-parallel
Strand 8
A
351 354anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il