Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZZ8 entry

There are 2 chains in PDB entry 2ZZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6GLU 242
B
 GLY 6GLU 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2ZZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
95 101Right-handed alpha
Helix 2
2
A
102 108Right-handed alpha
Helix 3
3
A
125 127Right-handed 310
Helix 4
4
A
128 135Right-handed alpha
Helix 5
5
A
173 178Right-handed 310
Helix 6
6
A
181 185Right-handed 310
Helix 7
7
A
229 241Right-handed alpha
Helix 8
8
B
95 101Right-handed alpha
Helix 9
9
B
102 108Right-handed alpha
Helix 10
10
B
125 127Right-handed 310
Helix 11
11
B
128 135Right-handed alpha
Helix 12
12
B
173 178Right-handed 310
Helix 13
13
B
181 185Right-handed 310
Helix 14
14
B
229 242Right-handed alpha
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There are 8 sheets in PDB entry 2ZZ8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 20first strand
Strand 2
A
27 33anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
36 44parallel
Strand 3
A
205 214anti-parallel
Strand 4
A
73 79anti-parallel
Strand 5
A
162 166anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
58 67anti-parallel
Strand 3
A
189 196anti-parallel
Strand 4
A
115 120anti-parallel
Strand 5
A
151 154anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
58 67anti-parallel
Strand 3
A
225 227anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 20first strand
Strand 2
B
27 33anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
36 44parallel
Strand 3
B
205 214anti-parallel
Strand 4
B
73 79anti-parallel
Strand 5
B
162 166anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
58 67anti-parallel
Strand 3
B
189 196anti-parallel
Strand 4
B
115 120anti-parallel
Strand 5
B
151 154anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
58 67anti-parallel
Strand 3
B
225 227anti-parallel
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