Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2ZZE entry

There are 78 chains in PDB entry 2ZZE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	MET 5
A	THR 7	ARG 17
A	CYS 20	CYS 20
A	VAL 22	GLY 24
A	PRO 26	ARG 55
A	TYR 57	GLU 64
A	PHE 66	GLU 71
A	HIS 73	VAL 81
A	ARG 83	GLY 157
A	PRO 159	LEU 178
A	MET 180	MET 180
A	PRO 182	TYR 219
A	ALA 222	ILE 234
A	GLY 236	THR 244
A	VAL 246	LEU 278
A	MET 281	VAL 361
A	ALA 363	ILE 395
A	GLU 397	PHE 405
A	GLU 407	LYS 421
A	TYR 423	GLU 452
A	LEU 454	VAL 468
A	GLU 470	MET 526
A	GLU 528	ALA 531
A	VAL 533	ILE 537
A	ASP 539	VAL 569
A	VAL 571	GLN 575
A	VAL 577	GLY 578
A	VAL 580	HIS 583
A	VAL 585	PHE 591
A	GLU 593	GLY 599
A	ILE 601	TRP 603
A	ARG 605	TYR 650
A	ARG 652	LEU 658
A	GLU 660	ARG 673
A	VAL 675	GLN 687
A	TYR 689	VAL 707
A	ILE 709	ALA 716
A	GLY 718	ILE 731
A	ILE 733	GLU 752
B	GLU 2	MET 5
B	THR 7	ARG 17
B	CYS 20	CYS 20
B	VAL 22	GLY 24
B	PRO 26	ARG 55
B	TYR 57	GLU 64
B	PHE 66	GLU 71
B	HIS 73	VAL 81
B	ARG 83	GLY 157
B	PRO 159	LEU 178
B	MET 180	MET 180
B	PRO 182	TYR 219
B	ALA 222	ILE 234
B	GLY 236	THR 244
B	VAL 246	LEU 278
B	MET 281	VAL 361
B	ALA 363	ILE 395
B	GLU 397	PHE 405
B	GLU 407	LYS 421
B	TYR 423	GLU 452
B	LEU 454	VAL 468
B	GLU 470	MET 526
B	GLU 528	ALA 531
B	VAL 533	ILE 537
B	ASP 539	VAL 569
B	VAL 571	GLN 575
B	VAL 577	GLY 578
B	VAL 580	HIS 583
B	VAL 585	PHE 591
B	GLU 593	GLY 599
B	ILE 601	TRP 603
B	ARG 605	TYR 650
B	ARG 652	LEU 658
B	GLU 660	ARG 673
B	VAL 675	GLN 687
B	TYR 689	VAL 707
B	ILE 709	ALA 716
B	GLY 718	ILE 731
B	ILE 733	GLU 752

There are 54 helices in PDB entry 2ZZE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	7	13	Right-handed alpha
Helix 2	2	A	58	72	Right-handed alpha
Helix 3	3	A	99	105	Right-handed 310
Helix 4	4	A	131	135	Right-handed 310
Helix 5	5	A	162	177	Right-handed alpha
Helix 6	6	A	181	183	Right-handed 310
Helix 7	7	A	253	262	Right-handed alpha
Helix 8	8	A	265	271	Right-handed alpha
Helix 9	9	A	271	283	Right-handed alpha
Helix 10	10	A	288	301	Right-handed alpha
Helix 11	11	A	309	322	Right-handed alpha
Helix 12	12	A	324	354	Right-handed alpha
Helix 13	13	A	361	381	Right-handed alpha
Helix 14	14	A	386	399	Right-handed alpha
Helix 15	15	A	403	408	Right-handed alpha
Helix 16	16	A	408	445	Right-handed alpha
Helix 17	17	A	450	462	Right-handed alpha
Helix 18	18	A	464	473	Right-handed alpha
Helix 19	19	A	484	491	Right-handed alpha
Helix 20	20	A	492	495	Right-handed 310
Helix 21	21	A	519	523	Right-handed alpha
Helix 22	22	A	587	591	Right-handed 310
Helix 23	23	A	602	628	Right-handed alpha
Helix 24	24	A	654	672	Right-handed alpha
Helix 25	25	A	682	690	Right-handed alpha
Helix 26	26	A	691	694	Right-handed 310
Helix 27	27	A	724	729	Right-handed 310
Helix 28	28	B	7	13	Right-handed alpha
Helix 29	29	B	58	72	Right-handed alpha
Helix 30	30	B	99	105	Right-handed 310
Helix 31	31	B	131	135	Right-handed 310
Helix 32	32	B	162	177	Right-handed alpha
Helix 33	33	B	181	183	Right-handed 310
Helix 34	34	B	253	262	Right-handed alpha
Helix 35	35	B	265	271	Right-handed alpha
Helix 36	36	B	271	283	Right-handed alpha
Helix 37	37	B	288	300	Right-handed alpha
Helix 38	38	B	308	322	Right-handed alpha
Helix 39	39	B	324	354	Right-handed alpha
Helix 40	40	B	361	381	Right-handed alpha
Helix 41	41	B	386	399	Right-handed alpha
Helix 42	42	B	403	408	Right-handed alpha
Helix 43	43	B	408	445	Right-handed alpha
Helix 44	44	B	450	462	Right-handed alpha
Helix 45	45	B	464	476	Right-handed alpha
Helix 46	46	B	484	491	Right-handed alpha
Helix 47	47	B	492	495	Right-handed 310
Helix 48	48	B	519	523	Right-handed alpha
Helix 49	49	B	587	591	Right-handed 310
Helix 50	50	B	602	628	Right-handed alpha
Helix 51	51	B	654	672	Right-handed alpha
Helix 52	52	B	682	690	Right-handed alpha
Helix 53	53	B	691	694	Right-handed 310
Helix 54	54	B	724	729	Right-handed 310

There are 12 sheets in PDB entry 2ZZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	19	first strand
Strand 2	A	26	29	anti-parallel
Strand 3	A	185	189	anti-parallel
Strand 4	A	201	206	anti-parallel
Strand 5	A	209	221	anti-parallel
Strand 6	A	237	252	anti-parallel
Strand 7	A	197	199	first strand
Strand 8	A	192	194	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	80	first strand
Strand 2	A	120	127	parallel
Strand 3	A	144	154	anti-parallel
Strand 4	A	237	252	anti-parallel
Strand 5	A	209	221	anti-parallel
Strand 6	A	231	233	first strand

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	518	first strand
Strand 2	A	545	546	parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	537	first strand
Strand 2	A	540	543	anti-parallel
Strand 3	A	580	585	anti-parallel
Strand 4	A	567	577	anti-parallel
Strand 5	A	560	564	anti-parallel
Strand 6	A	596	601	anti-parallel
Strand 7	A	528	537	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	638	first strand
Strand 2	A	643	648	anti-parallel
Strand 3	A	743	750	anti-parallel
Strand 4	A	731	740	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	681	first strand
Strand 2	A	703	709	anti-parallel
Strand 3	A	713	716	anti-parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	19	first strand
Strand 2	B	26	29	anti-parallel
Strand 3	B	185	189	anti-parallel
Strand 4	B	201	206	anti-parallel
Strand 5	B	209	221	anti-parallel
Strand 6	B	237	252	anti-parallel
Strand 7	B	197	199	first strand
Strand 8	B	192	193	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	80	first strand
Strand 2	B	120	127	parallel
Strand 3	B	144	154	anti-parallel
Strand 4	B	237	252	anti-parallel
Strand 5	B	209	221	anti-parallel
Strand 6	B	232	234	first strand

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	518	first strand
Strand 2	B	545	546	parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	537	first strand
Strand 2	B	540	543	anti-parallel
Strand 3	B	580	585	anti-parallel
Strand 4	B	567	577	anti-parallel
Strand 5	B	560	564	anti-parallel
Strand 6	B	596	601	anti-parallel
Strand 7	B	528	537	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	638	first strand
Strand 2	B	643	648	anti-parallel
Strand 3	B	743	750	anti-parallel
Strand 4	B	731	740	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	675	681	first strand
Strand 2	B	703	709	anti-parallel
Strand 3	B	713	716	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2ZZE

Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZE