Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZZI entry

There are 2 chains in PDB entry 2ZZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3LEU 200
B
 VAL 3THR 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2ZZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 44Right-handed alpha
Helix 2
2
A
56 61Right-handed alpha
Helix 3
3
A
62 71Right-handed alpha
Helix 4
4
A
77 79Right-handed 310
Helix 5
5
A
80 93Right-handed alpha
Helix 6
6
A
160 172Right-handed alpha
Helix 7
7
A
190 197Right-handed alpha
Helix 8
8
B
32 44Right-handed alpha
Helix 9
9
B
56 61Right-handed alpha
Helix 10
10
B
62 71Right-handed alpha
Helix 11
11
B
77 79Right-handed 310
Helix 12
12
B
80 93Right-handed alpha
Helix 13
13
B
160 172Right-handed alpha
Helix 14
14
B
190 197Right-handed alpha
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There are 6 sheets in PDB entry 2ZZI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
23 27anti-parallel
Strand 4
A
50 51parallel
Strand 5
A
74 76parallel
Strand 6
A
106 107parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
117 121anti-parallel
Strand 3
A
130 134anti-parallel
Strand 4
A
139 143anti-parallel
Strand 5
A
179 182parallel
Strand 6
A
188 189anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
150 151anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
13 20anti-parallel
Strand 3
B
23 27anti-parallel
Strand 4
B
50 51parallel
Strand 5
B
74 76parallel
Strand 6
B
106 107parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
117 121anti-parallel
Strand 3
B
130 134anti-parallel
Strand 4
B
139 143anti-parallel
Strand 5
B
179 182parallel
Strand 6
B
188 189anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
150 151anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il