Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZZQ entry

There is 1 chain in PDB entry 2ZZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 118ALA 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2ZZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
173 180Right-handed alpha
Helix 2
2
A
223 229Right-handed alpha
Helix 3
3
A
247 253Right-handed alpha
Helix 4
4
A
254 256Right-handed 310
Helix 5
5
A
267 272Right-handed alpha
Helix 6
6
A
345 350Right-handed alpha
Helix 7
7
A
352 356Right-handed 310
Helix 8
8
A
376 381Right-handed alpha
Helix 9
9
A
384 390Right-handed alpha
Helix 10
10
A
415 421Right-handed alpha
Helix 11
11
A
515 519Right-handed 310
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There are 7 sheets in PDB entry 2ZZQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 143first strand
Strand 2
A
298 308anti-parallel
Strand 3
A
184 196anti-parallel
Strand 4
A
242 246anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 143first strand
Strand 2
A
298 308anti-parallel
Strand 3
A
184 196anti-parallel
Strand 4
A
258 260anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 159first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
207 212anti-parallel
Strand 4
A
233 236anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
320 333anti-parallel
Strand 3
A
431 442anti-parallel
Strand 4
A
369 375anti-parallel
Strand 5
A
395 401anti-parallel
Strand 6
A
409 413anti-parallel
Strand 7
A
339 342anti-parallel
Strand 8
A
320 333anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
285 286anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 502first strand
Strand 2
A
470 475anti-parallel
Strand 3
A
595 600anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 495first strand
Strand 2
A
579 581anti-parallel
Strand 3
A
569 572anti-parallel
Strand 4
A
535 539anti-parallel
Strand 5
A
527 530anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il