Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZZR entry

There is 1 chain in PDB entry 2ZZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2TRP 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 2ZZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
25 48Right-handed alpha
Helix 3
3
A
70 86Right-handed alpha
Helix 4
4
A
87 107Right-handed alpha
Helix 5
5
A
115 121Right-handed alpha
Helix 6
6
A
123 132Right-handed alpha
Helix 7
7
A
133 149Right-handed alpha
Helix 8
8
A
166 169Right-handed 310
Helix 9
9
A
175 180Right-handed alpha
Helix 10
10
A
180 191Right-handed alpha
Helix 11
11
A
192 210Right-handed alpha
Helix 12
12
A
245 264Right-handed alpha
Helix 13
13
A
265 282Right-handed alpha
Helix 14
14
A
304 320Right-handed alpha
Helix 15
15
A
328 347Right-handed alpha
Helix 16
16
A
376 392Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2ZZR. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
157 158anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
220 223anti-parallel
Strand 3
A
230 234anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
370 374anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il