Analysis of interatomic Contacts of Structural Units in PDB entry:
30JZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 30JZ entry

There are 2 chains in PDB entry 30JZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 1013
B
 PRO 7MET 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 30JZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
18 29Right-handed alpha
Helix 3
AA3
A
34 45Right-handed alpha
Helix 4
AA4
A
49 68Right-handed alpha
Helix 5
AA5
A
84 93Right-handed alpha
Helix 6
AA6
A
94 101Right-handed alpha
Helix 7
AA7
A
103 122Right-handed alpha
Helix 8
AA8
A
127 138Right-handed alpha
Helix 9
AA9
A
144 159Right-handed alpha
Helix 10
AB1
A
163 166Right-handed 310
Helix 11
AB2
A
167 189Right-handed alpha
Helix 12
AB3
A
193 211Right-handed alpha
Helix 13
AB4
A
221 238Right-handed alpha
Helix 14
AB5
A
241 247Right-handed 310
Helix 15
AB6
A
251 254Right-handed 310
Helix 16
AB7
A
255 276Right-handed alpha
Helix 17
AB8
A
285 313Right-handed alpha
Helix 18
AB9
A
318 333Right-handed alpha
Helix 19
AC1
A
335 353Right-handed alpha
Helix 20
AC2
A
353 359Right-handed alpha
Helix 21
AC3
A
361 371Right-handed alpha
Helix 22
AC4
A
371 379Right-handed alpha
Helix 23
AC5
A
388 404Right-handed alpha
Helix 24
AC6
A
407 421Right-handed alpha
Helix 25
AC7
A
425 439Right-handed alpha
Helix 26
AC8
A
439 446Right-handed alpha
Helix 27
AC9
A
446 451Right-handed alpha
Helix 28
AD1
A
452 460Right-handed alpha
Helix 29
AD2
A
461 467Right-handed 310
Helix 30
AD3
A
469 483Right-handed alpha
Helix 31
AD4
A
490 508Right-handed alpha
Helix 32
AD5
A
510 528Right-handed alpha
Helix 33
AD6
A
529 535Right-handed 310
Helix 34
AD7
A
538 554Right-handed alpha
Helix 35
AD8
A
555 569Right-handed alpha
Helix 36
AD9
A
569 595Right-handed alpha
Helix 37
AE1
A
600 622Right-handed alpha
Helix 38
AE2
A
625 647Right-handed alpha
Helix 39
AE3
A
648 650Right-handed 310
Helix 40
AE4
A
651 663Right-handed alpha
Helix 41
AE5
A
668 673Right-handed alpha
Helix 42
AE6
A
673 684Right-handed alpha
Helix 43
AE7
A
689 704Right-handed alpha
Helix 44
AE8
A
704 711Right-handed alpha
Helix 45
AE9
A
712 728Right-handed alpha
Helix 46
AF1
A
731 749Right-handed alpha
Helix 47
AF2
A
756 771Right-handed alpha
Helix 48
AF3
A
775 793Right-handed alpha
Helix 49
AF4
A
793 803Right-handed alpha
Helix 50
AF5
A
812 824Right-handed alpha
Helix 51
AF6
A
825 828Right-handed 310
Helix 52
AF7
A
830 845Right-handed alpha
Helix 53
AF8
A
851 887Right-handed alpha
Helix 54
AF9
A
909 923Right-handed alpha
Helix 55
AG1
A
958 973Right-handed alpha
Helix 56
AG2
A
973 981Right-handed alpha
Helix 57
AG3
A
985 1013Right-handed alpha
Helix 58
AG4
B
22 32Right-handed alpha
Helix 59
AG5
B
77 81Right-handed 310
Helix 60
AG6
B
94 100Right-handed alpha
Helix 61
AG7
B
100 110Right-handed alpha
Helix 62
AG8
B
137 142Right-handed alpha
Helix 63
AG9
B
158 170Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 30JZ.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 54first strand
Strand 2
B
57 66anti-parallel
Strand 3
B
9 17parallel
Strand 4
B
85 91parallel
Strand 5
B
117 122parallel
Strand 6
B
145 148parallel
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