Analysis of interatomic Contacts of Structural Units in PDB entry:
30KW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 30KW entry

There are 4 chains in PDB entry 30KW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	ARG 1177
B	GLU 7	ARG 1177
C	GLU 7	ARG 1177
D	GLU 7	ARG 1177

There are213 helices in PDB entry 30KW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	15	Right-handed alpha
Helix 2	AA2	A	40	44	Right-handed 310
Helix 3	AA3	A	62	66	Right-handed alpha
Helix 4	AA4	A	98	109	Right-handed alpha
Helix 5	AA5	A	131	140	Right-handed alpha
Helix 6	AA6	A	141	150	Right-handed alpha
Helix 7	AA7	A	160	178	Right-handed alpha
Helix 8	AA8	A	197	201	Right-handed 310
Helix 9	AA9	A	246	259	Right-handed alpha
Helix 10	AB1	A	281	294	Right-handed alpha
Helix 11	AB2	A	305	318	Right-handed alpha
Helix 12	AB3	A	332	339	Right-handed alpha
Helix 13	AB4	A	343	357	Right-handed alpha
Helix 14	AB5	A	369	371	Right-handed 310
Helix 15	AB6	A	372	386	Right-handed alpha
Helix 16	AB7	A	395	404	Right-handed alpha
Helix 17	AB8	A	405	414	Right-handed alpha
Helix 18	AB9	A	421	435	Right-handed alpha
Helix 19	AC1	A	437	447	Right-handed alpha
Helix 20	AC2	A	450	455	Right-handed alpha
Helix 21	AC3	A	456	465	Right-handed alpha
Helix 22	AC4	A	471	481	Right-handed alpha
Helix 23	AC5	A	503	511	Right-handed alpha
Helix 24	AC6	A	558	569	Right-handed alpha
Helix 25	AC7	A	571	582	Right-handed alpha
Helix 26	AC8	A	584	601	Right-handed alpha
Helix 27	AC9	A	605	634	Right-handed alpha
Helix 28	AD1	A	634	644	Right-handed alpha
Helix 29	AD2	A	653	662	Right-handed alpha
Helix 30	AD3	A	663	668	Right-handed alpha
Helix 31	AD4	A	669	682	Right-handed alpha
Helix 32	AD5	A	689	699	Right-handed alpha
Helix 33	AD6	A	700	705	Right-handed 310
Helix 34	AD7	A	770	776	Right-handed alpha
Helix 35	AD8	A	778	803	Right-handed alpha
Helix 36	AD9	A	811	835	Right-handed alpha
Helix 37	AE1	A	852	860	Right-handed alpha
Helix 38	AE2	A	862	884	Right-handed alpha
Helix 39	AE3	A	887	905	Right-handed alpha
Helix 40	AE4	A	905	910	Right-handed alpha
Helix 41	AE5	A	911	913	Right-handed 310
Helix 42	AE6	A	916	924	Right-handed alpha
Helix 43	AE7	A	926	953	Right-handed alpha
Helix 44	AE8	A	958	973	Right-handed alpha
Helix 45	AE9	A	974	976	Right-handed 310
Helix 46	AF1	A	979	983	Right-handed 310
Helix 47	AF2	A	984	988	Right-handed 310
Helix 48	AF3	A	1016	1033	Right-handed alpha
Helix 49	AF4	A	1033	1050	Right-handed alpha
Helix 50	AF5	A	1050	1072	Right-handed alpha
Helix 51	AF6	A	1076	1088	Right-handed alpha
Helix 52	AF7	A	1114	1143	Right-handed alpha
Helix 53	AF8	A	1143	1176	Right-handed alpha
Helix 54	AF9	B	10	15	Right-handed alpha
Helix 55	AG1	B	40	44	Right-handed 310
Helix 56	AG2	B	98	108	Right-handed alpha
Helix 57	AG3	B	131	140	Right-handed alpha
Helix 58	AG4	B	141	150	Right-handed alpha
Helix 59	AG5	B	160	178	Right-handed alpha
Helix 60	AG6	B	197	201	Right-handed 310
Helix 61	AG7	B	246	259	Right-handed alpha
Helix 62	AG8	B	281	294	Right-handed alpha
Helix 63	AG9	B	305	318	Right-handed alpha
Helix 64	AH1	B	332	339	Right-handed alpha
Helix 65	AH2	B	346	356	Right-handed alpha
Helix 66	AH3	B	357	359	Right-handed 310
Helix 67	AH4	B	369	371	Right-handed 310
Helix 68	AH5	B	372	385	Right-handed alpha
Helix 69	AH6	B	395	404	Right-handed alpha
Helix 70	AH7	B	405	414	Right-handed alpha
Helix 71	AH8	B	421	435	Right-handed alpha
Helix 72	AH9	B	437	447	Right-handed alpha
Helix 73	AI1	B	450	455	Right-handed alpha
Helix 74	AI2	B	456	466	Right-handed alpha
Helix 75	AI3	B	471	476	Right-handed alpha
Helix 76	AI4	B	502	512	Right-handed alpha
Helix 77	AI5	B	558	569	Right-handed alpha
Helix 78	AI6	B	571	582	Right-handed alpha
Helix 79	AI7	B	585	601	Right-handed alpha
Helix 80	AI8	B	605	634	Right-handed alpha
Helix 81	AI9	B	634	644	Right-handed alpha
Helix 82	AJ1	B	653	662	Right-handed alpha
Helix 83	AJ2	B	663	668	Right-handed alpha
Helix 84	AJ3	B	669	682	Right-handed alpha
Helix 85	AJ4	B	689	699	Right-handed alpha
Helix 86	AJ5	B	700	705	Right-handed 310
Helix 87	AJ6	B	770	777	Right-handed alpha
Helix 88	AJ7	B	778	803	Right-handed alpha
Helix 89	AJ8	B	811	834	Right-handed alpha
Helix 90	AJ9	B	852	860	Right-handed alpha
Helix 91	AK1	B	862	884	Right-handed alpha
Helix 92	AK2	B	887	905	Right-handed alpha
Helix 93	AK3	B	905	910	Right-handed alpha
Helix 94	AK4	B	916	924	Right-handed alpha
Helix 95	AK5	B	926	953	Right-handed alpha
Helix 96	AK6	B	958	973	Right-handed alpha
Helix 97	AK7	B	974	976	Right-handed 310
Helix 98	AK8	B	979	983	Right-handed 310
Helix 99	AK9	B	1016	1033	Right-handed alpha
Helix 100	AL1	B	1033	1050	Right-handed alpha
Helix 101	AL2	B	1050	1068	Right-handed alpha
Helix 102	AL3	B	1069	1071	Right-handed 310
Helix 103	AL4	B	1076	1078	Right-handed 310
Helix 104	AL5	B	1079	1087	Right-handed alpha
Helix 105	AL6	B	1114	1142	Right-handed alpha
Helix 106	AL7	B	1143	1175	Right-handed alpha
Helix 107	AL8	C	10	15	Right-handed alpha
Helix 108	AL9	C	62	66	Right-handed alpha
Helix 109	AM1	C	98	108	Right-handed alpha
Helix 110	AM2	C	131	140	Right-handed alpha
Helix 111	AM3	C	141	150	Right-handed alpha
Helix 112	AM4	C	160	178	Right-handed alpha
Helix 113	AM5	C	197	201	Right-handed 310
Helix 114	AM6	C	246	259	Right-handed alpha
Helix 115	AM7	C	281	294	Right-handed alpha
Helix 116	AM8	C	305	318	Right-handed alpha
Helix 117	AM9	C	332	339	Right-handed alpha
Helix 118	AN1	C	346	357	Right-handed alpha
Helix 119	AN2	C	369	371	Right-handed 310
Helix 120	AN3	C	372	385	Right-handed alpha
Helix 121	AN4	C	395	404	Right-handed alpha
Helix 122	AN5	C	405	414	Right-handed alpha
Helix 123	AN6	C	421	435	Right-handed alpha
Helix 124	AN7	C	437	446	Right-handed alpha
Helix 125	AN8	C	450	455	Right-handed alpha
Helix 126	AN9	C	456	466	Right-handed alpha
Helix 127	AO1	C	471	481	Right-handed alpha
Helix 128	AO2	C	503	512	Right-handed alpha
Helix 129	AO3	C	558	569	Right-handed alpha
Helix 130	AO4	C	571	581	Right-handed alpha
Helix 131	AO5	C	584	601	Right-handed alpha
Helix 132	AO6	C	605	634	Right-handed alpha
Helix 133	AO7	C	634	644	Right-handed alpha
Helix 134	AO8	C	653	662	Right-handed alpha
Helix 135	AO9	C	663	668	Right-handed alpha
Helix 136	AP1	C	669	681	Right-handed alpha
Helix 137	AP2	C	689	699	Right-handed alpha
Helix 138	AP3	C	700	705	Right-handed 310
Helix 139	AP4	C	770	777	Right-handed alpha
Helix 140	AP5	C	778	803	Right-handed alpha
Helix 141	AP6	C	811	834	Right-handed alpha
Helix 142	AP7	C	852	860	Right-handed alpha
Helix 143	AP8	C	862	884	Right-handed alpha
Helix 144	AP9	C	887	905	Right-handed alpha
Helix 145	AQ1	C	905	910	Right-handed alpha
Helix 146	AQ2	C	911	913	Right-handed 310
Helix 147	AQ3	C	916	924	Right-handed alpha
Helix 148	AQ4	C	926	953	Right-handed alpha
Helix 149	AQ5	C	958	973	Right-handed alpha
Helix 150	AQ6	C	974	976	Right-handed 310
Helix 151	AQ7	C	979	983	Right-handed 310
Helix 152	AQ8	C	984	988	Right-handed 310
Helix 153	AQ9	C	1016	1033	Right-handed alpha
Helix 154	AR1	C	1033	1050	Right-handed alpha
Helix 155	AR2	C	1050	1069	Right-handed alpha
Helix 156	AR3	C	1070	1072	Right-handed 310
Helix 157	AR4	C	1076	1078	Right-handed 310
Helix 158	AR5	C	1079	1087	Right-handed alpha
Helix 159	AR6	C	1114	1142	Right-handed alpha
Helix 160	AR7	C	1143	1175	Right-handed alpha
Helix 161	AR8	D	10	15	Right-handed alpha
Helix 162	AR9	D	62	66	Right-handed alpha
Helix 163	AS1	D	98	108	Right-handed alpha
Helix 164	AS2	D	131	141	Right-handed alpha
Helix 165	AS3	D	141	150	Right-handed alpha
Helix 166	AS4	D	160	178	Right-handed alpha
Helix 167	AS5	D	197	201	Right-handed 310
Helix 168	AS6	D	246	259	Right-handed alpha
Helix 169	AS7	D	281	294	Right-handed alpha
Helix 170	AS8	D	305	318	Right-handed alpha
Helix 171	AS9	D	332	339	Right-handed alpha
Helix 172	AT1	D	346	356	Right-handed alpha
Helix 173	AT2	D	357	359	Right-handed 310
Helix 174	AT3	D	369	371	Right-handed 310
Helix 175	AT4	D	372	386	Right-handed alpha
Helix 176	AT5	D	395	404	Right-handed alpha
Helix 177	AT6	D	405	414	Right-handed alpha
Helix 178	AT7	D	421	435	Right-handed alpha
Helix 179	AT8	D	437	446	Right-handed alpha
Helix 180	AT9	D	450	455	Right-handed alpha
Helix 181	AU1	D	456	466	Right-handed alpha
Helix 182	AU2	D	471	481	Right-handed alpha
Helix 183	AU3	D	502	512	Right-handed alpha
Helix 184	AU4	D	558	569	Right-handed alpha
Helix 185	AU5	D	571	582	Right-handed alpha
Helix 186	AU6	D	584	601	Right-handed alpha
Helix 187	AU7	D	605	634	Right-handed alpha
Helix 188	AU8	D	634	644	Right-handed alpha
Helix 189	AU9	D	653	662	Right-handed alpha
Helix 190	AV1	D	663	668	Right-handed alpha
Helix 191	AV2	D	669	681	Right-handed alpha
Helix 192	AV3	D	689	699	Right-handed alpha
Helix 193	AV4	D	700	705	Right-handed 310
Helix 194	AV5	D	770	777	Right-handed alpha
Helix 195	AV6	D	778	803	Right-handed alpha
Helix 196	AV7	D	811	835	Right-handed alpha
Helix 197	AV8	D	852	861	Right-handed alpha
Helix 198	AV9	D	862	884	Right-handed alpha
Helix 199	AW1	D	887	905	Right-handed alpha
Helix 200	AW2	D	905	910	Right-handed alpha
Helix 201	AW3	D	916	924	Right-handed alpha
Helix 202	AW4	D	926	953	Right-handed alpha
Helix 203	AW5	D	958	973	Right-handed alpha
Helix 204	AW6	D	974	976	Right-handed 310
Helix 205	AW7	D	979	983	Right-handed 310
Helix 206	AW8	D	984	988	Right-handed 310
Helix 207	AW9	D	1016	1033	Right-handed alpha
Helix 208	AX1	D	1033	1050	Right-handed alpha
Helix 209	AX2	D	1050	1070	Right-handed alpha
Helix 210	AX3	D	1076	1078	Right-handed 310
Helix 211	AX4	D	1079	1087	Right-handed alpha
Helix 212	AX5	D	1114	1142	Right-handed alpha
Helix 213	AX6	D	1143	1176	Right-handed alpha

There are 9 sheets in PDB entry 30KW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	20	first strand
Strand 2	A	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	78	first strand
Strand 2	A	88	94	anti-parallel
Strand 3	A	231	236	parallel
Strand 4	A	184	190	parallel
Strand 5	A	152	156	parallel
Strand 6	A	118	122	parallel
Strand 7	A	273	277	parallel
Strand 8	A	298	301	parallel
Strand 9	A	361	364	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1000	1001	first strand
Strand 2	A	1012	1013	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	20	first strand
Strand 2	B	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	77	first strand
Strand 2	B	89	94	anti-parallel
Strand 3	B	231	236	parallel
Strand 4	B	185	190	parallel
Strand 5	B	152	156	parallel
Strand 6	B	118	123	parallel
Strand 7	B	273	279	parallel
Strand 8	B	298	301	parallel
Strand 9	B	361	364	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	20	first strand
Strand 2	C	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	78	first strand
Strand 2	C	88	94	anti-parallel
Strand 3	C	231	236	parallel
Strand 4	C	185	190	parallel
Strand 5	C	152	156	parallel
Strand 6	C	118	122	parallel
Strand 7	C	273	277	parallel
Strand 8	C	298	301	parallel
Strand 9	C	361	364	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	20	first strand
Strand 2	D	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	78	first strand
Strand 2	D	88	94	anti-parallel
Strand 3	D	231	236	parallel
Strand 4	D	185	190	parallel
Strand 5	D	152	156	parallel
Strand 6	D	118	122	parallel
Strand 7	D	273	277	parallel
Strand 8	D	298	301	parallel
Strand 9	D	361	364	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 30KW

Analysis of interatomic Contacts of Structural Units in PDB entry:
30KW