Analysis of interatomic Contacts of Structural Units in PDB entry:
30XM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 30XM entry

There are 2 chains in PDB entry 30XM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 154LEU 419
B
 LEU 155LEU 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 30XM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
156 167Right-handed alpha
Helix 2
AA2
A
180 203Right-handed alpha
Helix 3
AA3
A
206 221Right-handed alpha
Helix 4
AA4
A
235 241Right-handed alpha
Helix 5
AA5
A
242 246Right-handed 310
Helix 6
AA6
A
248 252Right-handed 310
Helix 7
AA7
A
266 278Right-handed alpha
Helix 8
AA8
A
320 336Right-handed alpha
Helix 9
AA9
A
370 377Right-handed 310
Helix 10
AB1
A
389 398Right-handed alpha
Helix 11
AB2
A
401 406Right-handed 310
Helix 12
AB3
B
156 167Right-handed alpha
Helix 13
AB4
B
180 203Right-handed alpha
Helix 14
AB5
B
206 221Right-handed alpha
Helix 15
AB6
B
235 241Right-handed alpha
Helix 16
AB7
B
249 253Right-handed 310
Helix 17
AB8
B
266 278Right-handed alpha
Helix 18
AB9
B
320 336Right-handed alpha
Helix 19
AC1
B
370 377Right-handed 310
Helix 20
AC2
B
389 398Right-handed alpha
Helix 21
AC3
B
401 406Right-handed 310
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There are 6 sheets in PDB entry 30XM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
285 294parallel
Strand 3
A
306 315anti-parallel
Strand 4
A
382 388anti-parallel
Strand 5
A
360 367anti-parallel
Strand 6
A
350 357anti-parallel
Strand 7
A
340 346anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
260 262anti-parallel
Strand 3
A
255 256anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
415 416anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 226first strand
Strand 2
B
285 294parallel
Strand 3
B
306 315anti-parallel
Strand 4
B
382 388anti-parallel
Strand 5
B
360 367anti-parallel
Strand 6
B
350 357anti-parallel
Strand 7
B
340 346anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 234first strand
Strand 2
B
260 262anti-parallel
Strand 3
B
255 256anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
411 412first strand
Strand 2
B
415 416anti-parallel
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