Analysis of interatomic Contacts of Structural Units in PDB entry:
30ZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 30ZP entry

There are 2 chains in PDB entry 30ZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4ALA 472
B
 SER 4PRO 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 30ZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 9Right-handed 310
Helix 2
AA2
A
10 20Right-handed alpha
Helix 3
AA3
A
24 44Right-handed alpha
Helix 4
AA4
A
50 68Right-handed alpha
Helix 5
AA5
A
96 100Right-handed 310
Helix 6
AA6
A
108 117Right-handed alpha
Helix 7
AA7
A
128 132Right-handed 310
Helix 8
AA8
A
158 167Right-handed alpha
Helix 9
AA9
A
182 190Right-handed alpha
Helix 10
AB1
A
222 234Right-handed alpha
Helix 11
AB2
A
250 255Right-handed alpha
Helix 12
AB3
A
276 293Right-handed alpha
Helix 13
AB4
A
307 315Right-handed alpha
Helix 14
AB5
A
315 322Right-handed alpha
Helix 15
AB6
A
328 332Right-handed 310
Helix 16
AB7
A
337 350Right-handed alpha
Helix 17
AB8
A
351 373Right-handed alpha
Helix 18
AB9
A
374 376Right-handed 310
Helix 19
AC1
A
396 400Right-handed 310
Helix 20
AC2
A
403 410Right-handed alpha
Helix 21
AC3
A
414 421Right-handed alpha
Helix 22
AC4
A
448 463Right-handed alpha
Helix 23
AC5
B
5 9Right-handed 310
Helix 24
AC6
B
10 20Right-handed alpha
Helix 25
AC7
B
24 44Right-handed alpha
Helix 26
AC8
B
50 68Right-handed alpha
Helix 27
AC9
B
96 100Right-handed 310
Helix 28
AD1
B
108 117Right-handed alpha
Helix 29
AD2
B
128 132Right-handed 310
Helix 30
AD3
B
158 167Right-handed alpha
Helix 31
AD4
B
182 190Right-handed alpha
Helix 32
AD5
B
222 234Right-handed alpha
Helix 33
AD6
B
250 255Right-handed alpha
Helix 34
AD7
B
276 288Right-handed alpha
Helix 35
AD8
B
288 293Right-handed alpha
Helix 36
AD9
B
307 315Right-handed alpha
Helix 37
AE1
B
315 321Right-handed alpha
Helix 38
AE2
B
322 324Right-handed 310
Helix 39
AE3
B
328 332Right-handed 310
Helix 40
AE4
B
337 350Right-handed alpha
Helix 41
AE5
B
351 373Right-handed alpha
Helix 42
AE6
B
374 376Right-handed 310
Helix 43
AE7
B
396 400Right-handed 310
Helix 44
AE8
B
403 410Right-handed alpha
Helix 45
AE9
B
414 421Right-handed alpha
Helix 46
AF1
B
448 463Right-handed alpha
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There are 3 sheets in PDB entry 30ZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
78 82parallel
Strand 4
A
172 177parallel
Strand 5
A
215 220anti-parallel
Strand 6
A
192 195anti-parallel
Strand 7
A
424 431anti-parallel
Strand 8
A
437 443anti-parallel
Strand 9
A
378 382anti-parallel
Strand 10
A
263 266parallel
Strand 11
A
296 299parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
120 125anti-parallel
Strand 3
B
78 82parallel
Strand 4
B
172 177parallel
Strand 5
B
215 220anti-parallel
Strand 6
B
192 195anti-parallel
Strand 7
B
424 431anti-parallel
Strand 8
B
437 443anti-parallel
Strand 9
B
378 382anti-parallel
Strand 10
B
263 266parallel
Strand 11
B
296 299parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
149 153anti-parallel
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