Analysis of interatomic Contacts of Structural Units in PDB entry:
31HY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 31HY entry

There are 6 chains in PDB entry 31HY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 222	THR 594
B	VAL 222	THR 594
C	VAL 222	THR 594
D	VAL 222	THR 594
E	VAL 222	THR 594
F	VAL 222	THR 594

There are 98 helices in PDB entry 31HY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	255	261	Right-handed alpha
Helix 2	AA2	A	301	308	Right-handed alpha
Helix 3	AA3	A	310	314	Right-handed 310
Helix 4	AA4	A	331	341	Right-handed alpha
Helix 5	AA5	A	358	374	Right-handed alpha
Helix 6	AA6	A	387	396	Right-handed alpha
Helix 7	AA7	A	410	432	Right-handed alpha
Helix 8	AA8	A	442	453	Right-handed alpha
Helix 9	AA9	A	460	464	Right-handed 310
Helix 10	AB1	A	466	469	Right-handed 310
Helix 11	AB2	A	470	477	Right-handed alpha
Helix 12	AB3	A	500	512	Right-handed alpha
Helix 13	AB4	A	521	526	Right-handed alpha
Helix 14	AB5	A	542	546	Right-handed 310
Helix 15	AB6	A	548	563	Right-handed alpha
Helix 16	AB7	A	566	579	Right-handed alpha
Helix 17	AB8	A	583	593	Right-handed alpha
Helix 18	AB9	B	254	262	Right-handed alpha
Helix 19	AC1	B	303	308	Right-handed alpha
Helix 20	AC2	B	331	341	Right-handed alpha
Helix 21	AC3	B	358	374	Right-handed alpha
Helix 22	AC4	B	387	398	Right-handed alpha
Helix 23	AC5	B	410	430	Right-handed alpha
Helix 24	AC6	B	441	453	Right-handed alpha
Helix 25	AC7	B	460	464	Right-handed 310
Helix 26	AC8	B	465	468	Right-handed 310
Helix 27	AC9	B	469	478	Right-handed alpha
Helix 28	AD1	B	500	512	Right-handed alpha
Helix 29	AD2	B	521	527	Right-handed alpha
Helix 30	AD3	B	542	546	Right-handed 310
Helix 31	AD4	B	548	563	Right-handed alpha
Helix 32	AD5	B	566	581	Right-handed alpha
Helix 33	AD6	B	583	593	Right-handed alpha
Helix 34	AD7	C	254	262	Right-handed alpha
Helix 35	AD8	C	283	287	Right-handed 310
Helix 36	AD9	C	303	308	Right-handed alpha
Helix 37	AE1	C	310	314	Right-handed 310
Helix 38	AE2	C	331	341	Right-handed alpha
Helix 39	AE3	C	358	374	Right-handed alpha
Helix 40	AE4	C	387	398	Right-handed alpha
Helix 41	AE5	C	410	431	Right-handed alpha
Helix 42	AE6	C	441	453	Right-handed alpha
Helix 43	AE7	C	460	464	Right-handed 310
Helix 44	AE8	C	466	468	Right-handed 310
Helix 45	AE9	C	469	477	Right-handed alpha
Helix 46	AF1	C	500	512	Right-handed alpha
Helix 47	AF2	C	521	526	Right-handed alpha
Helix 48	AF3	C	542	547	Right-handed alpha
Helix 49	AF4	C	548	563	Right-handed alpha
Helix 50	AF5	C	566	581	Right-handed alpha
Helix 51	AF6	C	583	594	Right-handed alpha
Helix 52	AF7	D	255	261	Right-handed alpha
Helix 53	AF8	D	301	307	Right-handed alpha
Helix 54	AF9	D	331	341	Right-handed alpha
Helix 55	AG1	D	358	374	Right-handed alpha
Helix 56	AG2	D	387	398	Right-handed alpha
Helix 57	AG3	D	410	430	Right-handed alpha
Helix 58	AG4	D	441	453	Right-handed alpha
Helix 59	AG5	D	460	464	Right-handed 310
Helix 60	AG6	D	466	468	Right-handed 310
Helix 61	AG7	D	469	477	Right-handed alpha
Helix 62	AG8	D	500	512	Right-handed alpha
Helix 63	AG9	D	521	526	Right-handed alpha
Helix 64	AH1	D	542	547	Right-handed alpha
Helix 65	AH2	D	548	563	Right-handed alpha
Helix 66	AH3	D	566	581	Right-handed alpha
Helix 67	AH4	D	583	593	Right-handed alpha
Helix 68	AH5	E	254	262	Right-handed alpha
Helix 69	AH6	E	303	308	Right-handed alpha
Helix 70	AH7	E	331	341	Right-handed alpha
Helix 71	AH8	E	358	374	Right-handed alpha
Helix 72	AH9	E	387	398	Right-handed alpha
Helix 73	AI1	E	410	430	Right-handed alpha
Helix 74	AI2	E	441	453	Right-handed alpha
Helix 75	AI3	E	460	464	Right-handed 310
Helix 76	AI4	E	465	468	Right-handed 310
Helix 77	AI5	E	469	477	Right-handed alpha
Helix 78	AI6	E	501	512	Right-handed alpha
Helix 79	AI7	E	521	526	Right-handed alpha
Helix 80	AI8	E	548	563	Right-handed alpha
Helix 81	AI9	E	566	581	Right-handed alpha
Helix 82	AJ1	E	583	593	Right-handed alpha
Helix 83	AJ2	F	254	262	Right-handed alpha
Helix 84	AJ3	F	303	308	Right-handed alpha
Helix 85	AJ4	F	331	341	Right-handed alpha
Helix 86	AJ5	F	358	374	Right-handed alpha
Helix 87	AJ6	F	387	398	Right-handed alpha
Helix 88	AJ7	F	410	431	Right-handed alpha
Helix 89	AJ8	F	441	452	Right-handed alpha
Helix 90	AJ9	F	460	464	Right-handed 310
Helix 91	AK1	F	466	468	Right-handed 310
Helix 92	AK2	F	469	477	Right-handed alpha
Helix 93	AK3	F	500	511	Right-handed alpha
Helix 94	AK4	F	521	527	Right-handed alpha
Helix 95	AK5	F	543	547	Right-handed 310
Helix 96	AK6	F	548	563	Right-handed alpha
Helix 97	AK7	F	566	581	Right-handed alpha
Helix 98	AK8	F	583	594	Right-handed alpha

There are 24 sheets in PDB entry 31HY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	227	first strand
Strand 2	A	269	274	anti-parallel
Strand 3	A	291	297	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	232	first strand
Strand 2	A	236	240	anti-parallel
Strand 3	A	250	254	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	480	482	anti-parallel
Strand 3	A	487	495	anti-parallel
Strand 4	A	434	439	parallel
Strand 5	A	379	383	parallel
Strand 6	A	401	404	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	480	482	anti-parallel
Strand 3	A	487	495	anti-parallel
Strand 4	A	348	353	parallel
Strand 5	A	516	519	parallel
Strand 6	A	539	540	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	251	253	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	223	232	anti-parallel
Strand 4	B	268	274	anti-parallel
Strand 5	B	291	297	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	316	317	first strand
Strand 2	B	481	482	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	405	first strand
Strand 2	B	379	384	parallel
Strand 3	B	434	440	parallel
Strand 4	B	487	494	parallel
Strand 5	B	348	352	parallel
Strand 6	B	516	520	parallel
Strand 7	B	533	540	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	227	first strand
Strand 2	C	269	274	anti-parallel
Strand 3	C	291	297	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	232	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	251	253	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	317	first strand
Strand 2	C	480	482	anti-parallel
Strand 3	C	487	494	anti-parallel
Strand 4	C	349	352	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	317	first strand
Strand 2	C	480	482	anti-parallel
Strand 3	C	487	494	anti-parallel
Strand 4	C	435	440	parallel
Strand 5	C	378	383	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	516	520	first strand
Strand 2	C	533	540	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	227	first strand
Strand 2	D	269	274	anti-parallel
Strand 3	D	293	297	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	232	first strand
Strand 2	D	236	240	anti-parallel
Strand 3	D	252	254	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	316	317	first strand
Strand 2	D	481	482	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	493	495	first strand
Strand 2	D	351	353	parallel
Strand 3	D	516	519	parallel
Strand 4	D	539	540	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	401	402	first strand
Strand 2	D	378	383	parallel
Strand 3	D	434	440	parallel
Strand 4	D	487	491	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	223	227	first strand
Strand 2	E	269	274	anti-parallel
Strand 3	E	289	297	anti-parallel
Strand 4	E	251	253	parallel
Strand 5	E	237	240	anti-parallel
Strand 6	E	229	231	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	316	317	first strand
Strand 2	E	481	482	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	491	495	first strand
Strand 2	E	349	353	parallel
Strand 3	E	516	519	parallel
Strand 4	E	539	540	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	401	403	first strand
Strand 2	E	378	383	parallel
Strand 3	E	434	440	parallel
Strand 4	E	487	488	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	227	first strand
Strand 2	F	269	274	anti-parallel
Strand 3	F	291	297	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	232	first strand
Strand 2	F	237	240	anti-parallel
Strand 3	F	251	253	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	401	406	first strand
Strand 2	F	378	386	parallel
Strand 3	F	435	440	parallel
Strand 4	F	490	494	parallel
Strand 5	F	348	352	parallel
Strand 6	F	516	519	parallel
Strand 7	F	539	540	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 31HY

Analysis of interatomic Contacts of Structural Units in PDB entry:
31HY