Analysis of interatomic Contacts of Structural Units in PDB entry:
33AT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 33AT entry

There is 1 chain in PDB entry 33AT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2ALA 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 33AT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 42Right-handed 310
Helix 2
AA2
A
43 55Right-handed alpha
Helix 3
AA3
A
71 75Right-handed 310
Helix 4
AA4
A
118 134Right-handed alpha
Helix 5
AA5
A
162 167Right-handed 310
Helix 6
AA6
A
181 193Right-handed alpha
Helix 7
AA7
A
213 229Right-handed alpha
Helix 8
AA8
A
234 253Right-handed alpha
Helix 9
AA9
A
258 263Right-handed alpha
Helix 10
AB1
A
264 281Right-handed alpha
Helix 11
AB2
A
289 295Right-handed alpha
Helix 12
AB3
A
303 319Right-handed alpha
Helix 13
AB4
A
328 349Right-handed alpha
Helix 14
AB5
A
386 397Right-handed alpha
Helix 15
AB6
A
400 415Right-handed alpha
Helix 16
AB7
A
429 433Right-handed alpha
Helix 17
AB8
A
442 475Right-handed alpha
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There are 6 sheets in PDB entry 33AT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
59 64anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
106 113anti-parallel
Strand 5
A
30 36parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
85 89anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
202 204parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
198 199anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
366 368parallel
Strand 3
A
358 359anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
372 374anti-parallel
Strand 3
A
378 383anti-parallel
Strand 4
A
418 424parallel
Strand 5
A
434 440anti-parallel
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