Analysis of interatomic Contacts of Structural Units in PDB entry:
33AV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 33AV entry

There is 1 chain in PDB entry 33AV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2PRO 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 33AV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 5Right-handed 310
Helix 2
AA2
A
10 23Right-handed alpha
Helix 3
AA3
A
39 41Right-handed 310
Helix 4
AA4
A
42 55Right-handed alpha
Helix 5
AA5
A
64 69Right-handed alpha
Helix 6
AA6
A
117 133Right-handed alpha
Helix 7
AA7
A
180 192Right-handed alpha
Helix 8
AA8
A
204 209Right-handed alpha
Helix 9
AA9
A
212 228Right-handed alpha
Helix 10
AB1
A
231 257Right-handed alpha
Helix 11
AB2
A
260 284Right-handed alpha
Helix 12
AB3
A
293 295Right-handed 310
Helix 13
AB4
A
296 307Right-handed alpha
Helix 14
AB5
A
320 332Right-handed alpha
Helix 15
AB6
A
344 355Right-handed alpha
Helix 16
AB7
A
365 376Right-handed alpha
Helix 17
AB8
A
385 395Right-handed alpha
Helix 18
AB9
A
410 418Right-handed alpha
Helix 19
AC1
A
436 443Right-handed alpha
Helix 20
AC2
A
452 455Right-handed 310
Helix 21
AC3
A
456 462Right-handed alpha
Helix 22
AC4
A
464 480Right-handed alpha
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There are 3 sheets in PDB entry 33AV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
57 63anti-parallel
Strand 3
A
94 99anti-parallel
Strand 4
A
105 112anti-parallel
Strand 5
A
28 35parallel
Strand 6
A
134 144parallel
Strand 7
A
196 203parallel
Strand 8
A
155 159anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 380first strand
Strand 2
A
358 360parallel
Strand 3
A
336 340parallel
Strand 4
A
311 315parallel
Strand 5
A
285 289parallel
Strand 6
A
449 451parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 383first strand
Strand 2
A
400 402parallel
Strand 3
A
426 428parallel
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