Analysis of interatomic Contacts of Structural Units in PDB entry:
33CU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 33CU entry

There are 2 chains in PDB entry 33CU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10PRO 330
B
 ALA 9GLU 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 33CU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 46Right-handed alpha
Helix 2
AA2
A
50 59Right-handed alpha
Helix 3
AA3
A
61 70Right-handed alpha
Helix 4
AA4
A
74 93Right-handed alpha
Helix 5
AA5
A
115 130Right-handed alpha
Helix 6
AA6
A
131 158Right-handed alpha
Helix 7
AA7
A
163 175Right-handed alpha
Helix 8
AA8
A
179 188Right-handed alpha
Helix 9
AA9
A
192 199Right-handed alpha
Helix 10
AB1
A
199 228Right-handed alpha
Helix 11
AB2
A
233 241Right-handed alpha
Helix 12
AB3
A
245 275Right-handed alpha
Helix 13
AB4
A
280 305Right-handed alpha
Helix 14
AB5
A
306 309Right-handed 310
Helix 15
AB6
B
30 46Right-handed alpha
Helix 16
AB7
B
50 59Right-handed alpha
Helix 17
AB8
B
61 70Right-handed alpha
Helix 18
AB9
B
74 93Right-handed alpha
Helix 19
AC1
B
115 130Right-handed alpha
Helix 20
AC2
B
131 159Right-handed alpha
Helix 21
AC3
B
163 175Right-handed alpha
Helix 22
AC4
B
179 188Right-handed alpha
Helix 23
AC5
B
192 199Right-handed alpha
Helix 24
AC6
B
199 228Right-handed alpha
Helix 25
AC7
B
233 241Right-handed alpha
Helix 26
AC8
B
245 275Right-handed alpha
Helix 27
AC9
B
280 305Right-handed alpha
Helix 28
AD1
B
306 309Right-handed 310
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There are 4 sheets in PDB entry 33CU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
322 325anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
106 109anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
B
322 325anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
106 109anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il