Analysis of interatomic Contacts of Structural Units in PDB entry:
33HM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 33HM entry

There is 1 chain in PDB entry 33HM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
ARG 345ARG 5148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are248 helices in PDB entry 33HM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
375 378Right-handed 310
Helix 2
AA2
B
395 397Right-handed 310
Helix 3
AA3
B
410 412Right-handed 310
Helix 4
AA4
B
489 512Right-handed alpha
Helix 5
AA5
B
517 536Right-handed alpha
Helix 6
AA6
B
549 552Right-handed 310
Helix 7
AA7
B
554 571Right-handed alpha
Helix 8
AA8
B
572 576Right-handed 310
Helix 9
AA9
B
578 582Right-handed 310
Helix 10
AB1
B
590 605Right-handed alpha
Helix 11
AB2
B
610 622Right-handed alpha
Helix 12
AB3
B
627 636Right-handed alpha
Helix 13
AB4
B
637 640Right-handed 310
Helix 14
AB5
B
641 659Right-handed alpha
Helix 15
AB6
B
663 674Right-handed alpha
Helix 16
AB7
B
680 684Right-handed 310
Helix 17
AB8
B
688 694Right-handed alpha
Helix 18
AB9
B
700 705Right-handed alpha
Helix 19
AC1
B
711 720Right-handed alpha
Helix 20
AC2
B
721 726Right-handed 310
Helix 21
AC3
B
727 736Right-handed alpha
Helix 22
AC4
B
739 750Right-handed alpha
Helix 23
AC5
B
750 755Right-handed alpha
Helix 24
AC6
B
757 759Right-handed 310
Helix 25
AC7
B
760 770Right-handed alpha
Helix 26
AC8
B
771 775Right-handed 310
Helix 27
AC9
B
780 802Right-handed alpha
Helix 28
AD1
B
803 807Right-handed 310
Helix 29
AD2
B
810 829Right-handed alpha
Helix 30
AD3
B
831 834Right-handed 310
Helix 31
AD4
B
835 852Right-handed alpha
Helix 32
AD5
B
864 889Right-handed alpha
Helix 33
AD6
B
907 917Right-handed alpha
Helix 34
AD7
B
921 924Right-handed 310
Helix 35
AD8
B
925 940Right-handed alpha
Helix 36
AD9
B
942 952Right-handed alpha
Helix 37
AE1
B
962 983Right-handed alpha
Helix 38
AE2
B
994 1010Right-handed alpha
Helix 39
AE3
B
1020 1031Right-handed alpha
Helix 40
AE4
B
1031 1044Right-handed alpha
Helix 41
AE5
B
1045 1051Right-handed 310
Helix 42
AE6
B
1052 1076Right-handed alpha
Helix 43
AE7
B
1079 1089Right-handed alpha
Helix 44
AE8
B
1089 1104Right-handed alpha
Helix 45
AE9
B
1112 1144Right-handed alpha
Helix 46
AF1
B
1154 1161Right-handed alpha
Helix 47
AF2
B
1167 1171Right-handed 310
Helix 48
AF3
B
1190 1204Right-handed alpha
Helix 49
AF4
B
1206 1223Right-handed alpha
Helix 50
AF5
B
1233 1241Right-handed alpha
Helix 51
AF6
B
1241 1259Right-handed alpha
Helix 52
AF7
B
1262 1270Right-handed alpha
Helix 53
AF8
B
1271 1274Right-handed 310
Helix 54
AF9
B
1276 1289Right-handed alpha
Helix 55
AG1
B
1295 1330Right-handed alpha
Helix 56
AG2
B
1335 1337Right-handed 310
Helix 57
AG3
B
1338 1352Right-handed alpha
Helix 58
AG4
B
1361 1370Right-handed alpha
Helix 59
AG5
B
1374 1387Right-handed alpha
Helix 60
AG6
B
1387 1398Right-handed alpha
Helix 61
AG7
B
1402 1415Right-handed alpha
Helix 62
AG8
B
1418 1440Right-handed alpha
Helix 63
AG9
B
1447 1465Right-handed alpha
Helix 64
AH1
B
1467 1478Right-handed alpha
Helix 65
AH2
B
1478 1485Right-handed alpha
Helix 66
AH3
B
1495 1507Right-handed alpha
Helix 67
AH4
B
1521 1525Right-handed alpha
Helix 68
AH5
B
1544 1558Right-handed alpha
Helix 69
AH6
B
1563 1593Right-handed alpha
Helix 70
AH7
B
1630 1660Right-handed alpha
Helix 71
AH8
B
1661 1666Right-handed 310
Helix 72
AH9
B
1667 1679Right-handed alpha
Helix 73
AI1
B
1684 1692Right-handed alpha
Helix 74
AI2
B
1699 1711Right-handed alpha
Helix 75
AI3
B
1712 1733Right-handed alpha
Helix 76
AI4
B
1735 1750Right-handed alpha
Helix 77
AI5
B
1750 1755Right-handed alpha
Helix 78
AI6
B
1760 1776Right-handed alpha
Helix 79
AI7
B
1798 1800Right-handed 310
Helix 80
AI8
B
1801 1811Right-handed alpha
Helix 81
AI9
B
1832 1845Right-handed alpha
Helix 82
AJ1
B
1859 1862Right-handed 310
Helix 83
AJ2
B
1863 1880Right-handed alpha
Helix 84
AJ3
B
1899 1905Right-handed alpha
Helix 85
AJ4
B
1906 1909Right-handed 310
Helix 86
AJ5
B
1917 1930Right-handed alpha
Helix 87
AJ6
B
1937 1941Right-handed 310
Helix 88
AJ7
B
1959 1976Right-handed alpha
Helix 89
AJ8
B
1993 2002Right-handed alpha
Helix 90
AJ9
B
2003 2005Right-handed 310
Helix 91
AK1
B
2006 2011Right-handed alpha
Helix 92
AK2
B
2027 2037Right-handed alpha
Helix 93
AK3
B
2080 2086Right-handed alpha
Helix 94
AK4
B
2095 2103Right-handed alpha
Helix 95
AK5
B
2116 2122Right-handed alpha
Helix 96
AK6
B
2122 2137Right-handed alpha
Helix 97
AK7
B
2154 2166Right-handed alpha
Helix 98
AK8
B
2172 2193Right-handed alpha
Helix 99
AK9
B
2207 2224Right-handed alpha
Helix 100
AL1
B
2250 2255Right-handed alpha
Helix 101
AL2
B
2309 2318Right-handed alpha
Helix 102
AL3
B
2325 2329Right-handed 310
Helix 103
AL4
B
2330 2343Right-handed alpha
Helix 104
AL5
B
2357 2374Right-handed alpha
Helix 105
AL6
B
2386 2400Right-handed alpha
Helix 106
AL7
B
2417 2440Right-handed alpha
Helix 107
AL8
B
2450 2454Right-handed 310
Helix 108
AL9
B
2455 2464Right-handed alpha
Helix 109
AM1
B
2492 2501Right-handed alpha
Helix 110
AM2
B
2523 2525Right-handed 310
Helix 111
AM3
B
2533 2538Right-handed 310
Helix 112
AM4
B
2547 2563Right-handed alpha
Helix 113
AM5
B
2569 2589Right-handed alpha
Helix 114
AM6
B
2598 2615Right-handed alpha
Helix 115
AM7
B
2615 2630Right-handed alpha
Helix 116
AM8
B
2632 2636Right-handed 310
Helix 117
AM9
B
2640 2654Right-handed alpha
Helix 118
AN1
B
2660 2670Right-handed alpha
Helix 119
AN2
B
2678 2697Right-handed alpha
Helix 120
AN3
B
2706 2723Right-handed alpha
Helix 121
AN4
B
2736 2747Right-handed alpha
Helix 122
AN5
B
2748 2752Right-handed 310
Helix 123
AN6
B
2754 2759Right-handed alpha
Helix 124
AN7
B
2775 2791Right-handed alpha
Helix 125
AN8
B
2806 2811Right-handed alpha
Helix 126
AN9
B
2816 2819Right-handed 310
Helix 127
AO1
B
2820 2828Right-handed alpha
Helix 128
AO2
B
2835 2839Right-handed 310
Helix 129
AO3
B
2852 2856Right-handed 310
Helix 130
AO4
B
2867 2880Right-handed alpha
Helix 131
AO5
B
2883 2890Right-handed alpha
Helix 132
AO6
B
2892 2907Right-handed alpha
Helix 133
AO7
B
2913 2932Right-handed alpha
Helix 134
AO8
B
2936 2948Right-handed alpha
Helix 135
AO9
B
2955 2963Right-handed alpha
Helix 136
AP1
B
2964 2968Right-handed 310
Helix 137
AP2
B
2974 2984Right-handed alpha
Helix 138
AP3
B
3010 3018Right-handed alpha
Helix 139
AP4
B
3037 3056Right-handed alpha
Helix 140
AP5
B
3063 3077Right-handed alpha
Helix 141
AP6
B
3113 3119Right-handed alpha
Helix 142
AP7
B
3121 3128Right-handed alpha
Helix 143
AP8
B
3134 3139Right-handed alpha
Helix 144
AP9
B
3140 3159Right-handed alpha
Helix 145
AQ1
B
3172 3177Right-handed alpha
Helix 146
AQ2
B
3183 3197Right-handed alpha
Helix 147
AQ3
B
3202 3219Right-handed alpha
Helix 148
AQ4
B
3222 3229Right-handed alpha
Helix 149
AQ5
B
3230 3232Right-handed 310
Helix 150
AQ6
B
3234 3249Right-handed alpha
Helix 151
AQ7
B
3254 3265Right-handed alpha
Helix 152
AQ8
B
3285 3296Right-handed alpha
Helix 153
AQ9
B
3313 3327Right-handed alpha
Helix 154
AR1
B
3345 3365Right-handed alpha
Helix 155
AR2
B
3383 3388Right-handed alpha
Helix 156
AR3
B
3413 3419Right-handed alpha
Helix 157
AR4
B
3421 3426Right-handed alpha
Helix 158
AR5
B
3470 3475Right-handed 310
Helix 159
AR6
B
3476 3491Right-handed alpha
Helix 160
AR7
B
3496 3500Right-handed 310
Helix 161
AR8
B
3501 3513Right-handed alpha
Helix 162
AR9
B
3517 3541Right-handed alpha
Helix 163
AS1
B
3543 3548Right-handed alpha
Helix 164
AS2
B
3548 3556Right-handed alpha
Helix 165
AS3
B
3556 3564Right-handed alpha
Helix 166
AS4
B
3565 3589Right-handed alpha
Helix 167
AS5
B
3590 3592Right-handed 310
Helix 168
AS6
B
3593 3600Right-handed alpha
Helix 169
AS7
B
3604 3616Right-handed alpha
Helix 170
AS8
B
3657 3676Right-handed alpha
Helix 171
AS9
B
3677 3679Right-handed 310
Helix 172
AT1
B
3680 3692Right-handed alpha
Helix 173
AT2
B
3692 3700Right-handed alpha
Helix 174
AT3
B
3702 3722Right-handed alpha
Helix 175
AT4
B
3726 3748Right-handed alpha
Helix 176
AT5
B
3761 3771Right-handed alpha
Helix 177
AT6
B
3771 3785Right-handed alpha
Helix 178
AT7
B
3787 3793Right-handed alpha
Helix 179
AT8
B
3807 3823Right-handed alpha
Helix 180
AT9
B
3828 3848Right-handed alpha
Helix 181
AU1
B
3849 3853Right-handed 310
Helix 182
AU2
B
3856 3883Right-handed alpha
Helix 183
AU3
B
3883 3891Right-handed alpha
Helix 184
AU4
B
3894 3911Right-handed alpha
Helix 185
AU5
B
3917 3940Right-handed alpha
Helix 186
AU6
B
3968 3974Right-handed alpha
Helix 187
AU7
B
3998 4026Right-handed alpha
Helix 188
AU8
B
4035 4046Right-handed alpha
Helix 189
AU9
B
4082 4090Right-handed alpha
Helix 190
AV1
B
4092 4111Right-handed alpha
Helix 191
AV2
B
4117 4139Right-handed alpha
Helix 192
AV3
B
4142 4157Right-handed alpha
Helix 193
AV4
B
4171 4197Right-handed alpha
Helix 194
AV5
B
4202 4219Right-handed alpha
Helix 195
AV6
B
4222 4245Right-handed alpha
Helix 196
AV7
B
4251 4255Right-handed 310
Helix 197
AV8
B
4256 4263Right-handed alpha
Helix 198
AV9
B
4271 4276Right-handed 310
Helix 199
AW1
B
4277 4294Right-handed alpha
Helix 200
AW2
B
4296 4306Right-handed alpha
Helix 201
AW3
B
4309 4330Right-handed alpha
Helix 202
AW4
B
4342 4353Right-handed alpha
Helix 203
AW5
B
4354 4357Right-handed 310
Helix 204
AW6
B
4358 4371Right-handed alpha
Helix 205
AW7
B
4373 4378Right-handed 310
Helix 206
AW8
B
4382 4403Right-handed alpha
Helix 207
AW9
B
4405 4407Right-handed 310
Helix 208
AX1
B
4408 4416Right-handed alpha
Helix 209
AX2
B
4417 4422Right-handed 310
Helix 210
AX3
B
4522 4544Right-handed alpha
Helix 211
AX4
B
4544 4552Right-handed alpha
Helix 212
AX5
B
4558 4579Right-handed alpha
Helix 213
AX6
B
4581 4599Right-handed alpha
Helix 214
AX7
B
4613 4633Right-handed alpha
Helix 215
AX8
B
4634 4649Right-handed alpha
Helix 216
AX9
B
4655 4662Right-handed alpha
Helix 217
AY1
B
4665 4669Right-handed 310
Helix 218
AY2
B
4691 4702Right-handed alpha
Helix 219
AY3
B
4703 4708Right-handed alpha
Helix 220
AY4
B
4708 4717Right-handed alpha
Helix 221
AY5
B
4717 4722Right-handed alpha
Helix 222
AY6
B
4723 4725Right-handed 310
Helix 223
AY7
B
4726 4741Right-handed alpha
Helix 224
AY8
B
4751 4758Right-handed alpha
Helix 225
AY9
B
4761 4789Right-handed alpha
Helix 226
AZ1
B
4797 4801Right-handed 310
Helix 227
AZ2
B
4808 4812Right-handed 310
Helix 228
AZ3
B
4817 4819Right-handed 310
Helix 229
AZ4
B
4820 4845Right-handed alpha
Helix 230
AZ5
B
4856 4858Right-handed 310
Helix 231
AZ6
B
4859 4863Right-handed 310
Helix 232
AZ7
B
4871 4879Right-handed alpha
Helix 233
AZ8
B
4895 4908Right-handed alpha
Helix 234
AZ9
B
4929 4941Right-handed alpha
Helix 235
BA1
B
4947 4958Right-handed alpha
Helix 236
BA2
B
4960 4981Right-handed alpha
Helix 237
BA3
B
4988 4995Right-handed alpha
Helix 238
BA4
B
5003 5010Right-handed alpha
Helix 239
BA5
B
5011 5013Right-handed 310
Helix 240
BA6
B
5014 5016Right-handed 310
Helix 241
BA7
B
5017 5036Right-handed alpha
Helix 242
BA8
B
5045 5049Right-handed 310
Helix 243
BA9
B
5053 5067Right-handed alpha
Helix 244
BB1
B
5068 5084Right-handed alpha
Helix 245
BB2
B
5098 5109Right-handed alpha
Helix 246
BB3
B
5114 5122Right-handed alpha
Helix 247
BB4
B
5127 5129Right-handed 310
Helix 248
BB5
B
5130 5148Right-handed alpha
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There are 26 sheets in PDB entry 33HM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
389 393first strand
Strand 2
B
399 408anti-parallel
Strand 3
B
347 356anti-parallel
Strand 4
B
463 471parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
368 373first strand
Strand 2
B
416 423anti-parallel
Strand 3
B
433 434anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
368 373first strand
Strand 2
B
416 423anti-parallel
Strand 3
B
449 452anti-parallel
Strand 4
B
539 541anti-parallel
Strand 5
B
545 547anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
894 895first strand
Strand 2
B
902 903anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1149 1150first strand
Strand 2
B
1231 1232parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1173 1174first strand
Strand 2
B
1182 1183anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1540 1543first strand
Strand 2
B
1526 1531anti-parallel
Strand 3
B
1508 1511anti-parallel
Strand 4
B
1602 1606anti-parallel
Strand 5
B
1612 1616anti-parallel
Strand 6
B
1625 1627anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1794 1797first strand
Strand 2
B
1887 1893parallel
Strand 3
B
1853 1857parallel
Strand 4
B
1824 1826parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1982 1987first strand
Strand 2
B
2014 2020parallel
Strand 3
B
2055 2062parallel
Strand 4
B
1948 1953parallel
Strand 5
B
2090 2092parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2040 2042first strand
Strand 2
B
2048 2050anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2266 2270first strand
Strand 2
B
2275 2279anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2282 2285first strand
Strand 2
B
2290 2294anti-parallel
Strand 3
B
2301 2308anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2407 2411first strand
Strand 2
B
2443 2448parallel
Strand 3
B
2479 2485parallel
Strand 4
B
2377 2380parallel
Strand 5
B
2540 2542parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2467 2468first strand
Strand 2
B
2471 2472anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2516 2517first strand
Strand 2
B
2520 2521anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2762 2769first strand
Strand 2
B
2798 2805parallel
Strand 3
B
2841 2846parallel
Strand 4
B
2726 2729parallel
Strand 5
B
2859 2862parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3026 3028first strand
Strand 2
B
3059 3061parallel
Strand 3
B
3107 3112parallel
Strand 4
B
3002 3006parallel
Strand 5
B
3129 3132parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3080 3081first strand
Strand 2
B
3086 3092anti-parallel
Strand 3
B
3095 3101anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3304 3307first strand
Strand 2
B
3331 3339parallel
Strand 3
B
3370 3378parallel
Strand 4
B
3272 3279parallel
Strand 5
B
3396 3400parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3492 3494first strand
Strand 2
B
3639 3641parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3636 3637first strand
Strand 2
B
4927 4928anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3957 3960first strand
Strand 2
B
3964 3967anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4047 4048first strand
Strand 2
B
4063 4064anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4079 4081first strand
Strand 2
B
4880 4885anti-parallel
Strand 3
B
4890 4894anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4449 4450first strand
Strand 2
B
4456 4457anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4852 4854first strand
Strand 2
B
4913 4915parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il