Analysis of interatomic Contacts of Structural Units in PDB entry:
35ZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 35ZR entry

There are 3 chains in PDB entry 35ZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 196TYR 454
B
 ASP 165VAL 428
D
 ASN 7ASN 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 35ZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
207 211Right-handed 310
Helix 2
AA2
A
214 226Right-handed alpha
Helix 3
AA3
A
226 231Right-handed alpha
Helix 4
AA4
A
231 239Right-handed alpha
Helix 5
AA5
A
255 267Right-handed alpha
Helix 6
AA6
A
276 280Right-handed alpha
Helix 7
AA7
A
288 301Right-handed alpha
Helix 8
AA8
A
311 316Right-handed alpha
Helix 9
AA9
A
327 343Right-handed alpha
Helix 10
AB1
A
357 361Right-handed 310
Helix 11
AB2
A
381 394Right-handed alpha
Helix 12
AB3
A
403 410Right-handed alpha
Helix 13
AB4
A
415 433Right-handed alpha
Helix 14
AB5
A
439 451Right-handed alpha
Helix 15
AB6
B
166 171Right-handed alpha
Helix 16
AB7
B
180 184Right-handed 310
Helix 17
AB8
B
187 198Right-handed alpha
Helix 18
AB9
B
198 204Right-handed alpha
Helix 19
AC1
B
204 212Right-handed alpha
Helix 20
AC2
B
228 241Right-handed alpha
Helix 21
AC3
B
249 255Right-handed alpha
Helix 22
AC4
B
259 274Right-handed alpha
Helix 23
AC5
B
284 292Right-handed alpha
Helix 24
AC6
B
301 316Right-handed alpha
Helix 25
AC7
B
330 334Right-handed 310
Helix 26
AC8
B
354 367Right-handed alpha
Helix 27
AC9
B
388 406Right-handed alpha
Helix 28
AD1
B
412 428Right-handed alpha
Helix 29
AD2
D
8 21Right-handed alpha
Helix 30
AD3
D
28 43Right-handed alpha
Helix 31
AD4
D
51 65Right-handed alpha
Helix 32
AD5
D
72 84Right-handed alpha
Helix 33
AD6
D
88 96Right-handed alpha
Helix 34
AD7
D
97 107Right-handed alpha
Helix 35
AD8
D
109 122Right-handed alpha
Helix 36
AD9
D
127 132Right-handed 310
Helix 37
AE1
D
133 143Right-handed alpha
Helix 38
AE2
D
149 164Right-handed alpha
Helix 39
AE3
D
166 175Right-handed alpha
Helix 40
AE4
D
177 188Right-handed alpha
Helix 41
AE5
D
189 207Right-handed alpha
Helix 42
AE6
D
213 218Right-handed alpha
Helix 43
AE7
D
220 228Right-handed alpha
Helix 44
AE8
D
230 252Right-handed alpha
Helix 45
AE9
D
253 255Right-handed 310
Helix 46
AF1
D
256 261Right-handed alpha
Helix 47
AF2
D
263 273Right-handed alpha
Helix 48
AF3
D
277 284Right-handed alpha
Helix 49
AF4
D
284 296Right-handed alpha
Helix 50
AF5
D
303 313Right-handed alpha
Helix 51
AF6
D
322 330Right-handed alpha
Helix 52
AF7
D
331 339Right-handed alpha
Helix 53
AF8
D
339 347Right-handed alpha
Helix 54
AF9
D
350 352Right-handed 310
Helix 55
AG1
D
353 361Right-handed alpha
Helix 56
AG2
D
363 371Right-handed alpha
Helix 57
AG3
D
375 381Right-handed alpha
Helix 58
AG4
D
383 395Right-handed alpha
Helix 59
AG5
D
397 408Right-handed alpha
Helix 60
AG6
D
408 417Right-handed alpha
Helix 61
AG7
D
426 442Right-handed alpha
Helix 62
AG8
D
444 449Right-handed alpha
Helix 63
AG9
D
451 465Right-handed alpha
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There are 2 sheets in PDB entry 35ZR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
304 309parallel
Strand 4
A
349 355parallel
Strand 5
A
245 249parallel
Strand 6
A
373 376parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
243 248anti-parallel
Strand 3
B
277 282parallel
Strand 4
B
322 328parallel
Strand 5
B
218 223parallel
Strand 6
B
347 350parallel
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