Analysis of interatomic Contacts of Structural Units in PDB entry:
36AD

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 36AD entry

There are 2 chains in PDB entry 36AD (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 49	LYS 510
B	SER 49	MET 259

There are 82 helices in PDB entry 36AD. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	69	79	Right-handed alpha
Helix 2	AA2	A	83	87	Right-handed 310
Helix 3	AA3	A	89	108	Right-handed alpha
Helix 4	AA4	A	109	111	Right-handed 310
Helix 5	AA5	A	113	129	Right-handed alpha
Helix 6	AA6	A	132	136	Right-handed 310
Helix 7	AA7	A	146	165	Right-handed alpha
Helix 8	AA8	A	190	206	Right-handed alpha
Helix 9	AA9	A	206	225	Right-handed alpha
Helix 10	AB1	A	244	265	Right-handed alpha
Helix 11	AB2	A	288	302	Right-handed alpha
Helix 12	AB3	A	310	317	Right-handed alpha
Helix 13	AB4	A	318	346	Right-handed alpha
Helix 14	AB5	A	374	400	Right-handed alpha
Helix 15	AB6	A	408	434	Right-handed alpha
Helix 16	AB7	A	441	452	Right-handed alpha
Helix 17	AB8	A	453	458	Right-handed 310
Helix 18	AB9	A	459	479	Right-handed alpha
Helix 19	AC1	A	481	489	Right-handed alpha
Helix 20	AC2	A	493	501	Right-handed alpha
Helix 21	AC3	A	502	507	Right-handed 310
Helix 22	AC4	B	69	79	Right-handed alpha
Helix 23	AC5	B	83	87	Right-handed 310
Helix 24	AC6	B	89	108	Right-handed alpha
Helix 25	AC7	B	109	111	Right-handed 310
Helix 26	AC8	B	113	129	Right-handed alpha
Helix 27	AC9	B	132	136	Right-handed 310
Helix 28	AD1	B	146	165	Right-handed alpha
Helix 29	AD2	B	186	206	Right-handed alpha
Helix 30	AD3	B	206	225	Right-handed alpha
Helix 31	AD4	B	244	265	Right-handed alpha
Helix 32	AD5	B	288	302	Right-handed alpha
Helix 33	AD6	B	310	317	Right-handed alpha
Helix 34	AD7	B	318	346	Right-handed alpha
Helix 35	AD8	B	374	400	Right-handed alpha
Helix 36	AD9	B	408	434	Right-handed alpha
Helix 37	AE1	B	441	452	Right-handed alpha
Helix 38	AE2	B	453	458	Right-handed 310
Helix 39	AE3	B	459	479	Right-handed alpha
Helix 40	AE4	B	481	489	Right-handed alpha
Helix 41	AE5	B	493	501	Right-handed alpha
Helix 42	AE6	B	502	506	Right-handed 310
Helix 43	AE7	C	69	79	Right-handed alpha
Helix 44	AE8	C	83	87	Right-handed 310
Helix 45	AE9	C	89	108	Right-handed alpha
Helix 46	AF1	C	109	111	Right-handed 310
Helix 47	AF2	C	113	129	Right-handed alpha
Helix 48	AF3	C	132	136	Right-handed 310
Helix 49	AF4	C	146	165	Right-handed alpha
Helix 50	AF5	C	186	206	Right-handed alpha
Helix 51	AF6	C	206	225	Right-handed alpha
Helix 52	AF7	C	244	265	Right-handed alpha
Helix 53	AF8	C	288	302	Right-handed alpha
Helix 54	AF9	C	310	317	Right-handed alpha
Helix 55	AG1	C	318	346	Right-handed alpha
Helix 56	AG2	C	374	400	Right-handed alpha
Helix 57	AG3	C	408	434	Right-handed alpha
Helix 58	AG4	C	435	438	Right-handed 310
Helix 59	AG5	C	441	452	Right-handed alpha
Helix 60	AG6	C	502	506	Right-handed 310
Helix 61	AG7	D	69	79	Right-handed alpha
Helix 62	AG8	D	83	87	Right-handed 310
Helix 63	AG9	D	89	108	Right-handed alpha
Helix 64	AH1	D	109	111	Right-handed 310
Helix 65	AH2	D	113	129	Right-handed alpha
Helix 66	AH3	D	132	136	Right-handed 310
Helix 67	AH4	D	146	165	Right-handed alpha
Helix 68	AH5	D	186	206	Right-handed alpha
Helix 69	AH6	D	206	225	Right-handed alpha
Helix 70	AH7	D	244	265	Right-handed alpha
Helix 71	AH8	D	288	302	Right-handed alpha
Helix 72	AH9	D	310	317	Right-handed alpha
Helix 73	AI1	D	318	346	Right-handed alpha
Helix 74	AI2	D	374	400	Right-handed alpha
Helix 75	AI3	D	408	434	Right-handed alpha
Helix 76	AI4	D	435	438	Right-handed 310
Helix 77	AI5	D	441	452	Right-handed alpha
Helix 78	AI6	D	453	458	Right-handed 310
Helix 79	AI7	D	459	479	Right-handed alpha
Helix 80	AI8	D	481	489	Right-handed alpha
Helix 81	AI9	D	493	501	Right-handed alpha
Helix 82	AJ1	D	502	507	Right-handed 310

There are 16 sheets in PDB entry 36AD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	58	63	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	234	first strand
Strand 2	A	237	243	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	272	first strand
Strand 2	A	306	307	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	357	first strand
Strand 2	A	439	440	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	58	63	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	237	243	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	272	first strand
Strand 2	B	306	307	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	357	first strand
Strand 2	B	439	440	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	58	63	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	234	first strand
Strand 2	C	237	243	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	272	first strand
Strand 2	C	306	307	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	357	first strand
Strand 2	C	439	440	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	55	first strand
Strand 2	D	58	63	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	234	first strand
Strand 2	D	237	243	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	272	first strand
Strand 2	D	306	307	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	357	first strand
Strand 2	D	439	440	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 36AD

Analysis of interatomic Contacts of Structural Units in PDB entry:
36AD