Analysis of interatomic Contacts of Structural Units in PDB entry:
36GK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 36GK entry

There are 5 chains in PDB entry 36GK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 20	ASN 306
B	HIS 20	ASN 306
C	HIS 20	ASN 306
D	HIS 20	ASN 306
E	HIS 20	GLY 204

There are 33 helices in PDB entry 36GK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	55	66	Right-handed alpha
Helix 2	AA2	A	90	98	Right-handed alpha
Helix 3	AA3	A	99	105	Right-handed 310
Helix 4	AA4	A	209	211	Right-handed 310
Helix 5	AA5	A	230	234	Right-handed alpha
Helix 6	AA6	A	235	237	Right-handed 310
Helix 7	AA7	B	46	51	Right-handed alpha
Helix 8	AA8	B	55	66	Right-handed alpha
Helix 9	AA9	B	90	98	Right-handed alpha
Helix 10	AB1	B	99	105	Right-handed 310
Helix 11	AB2	B	209	211	Right-handed 310
Helix 12	AB3	B	230	234	Right-handed alpha
Helix 13	AB4	B	235	237	Right-handed 310
Helix 14	AB5	C	46	51	Right-handed alpha
Helix 15	AB6	C	55	66	Right-handed alpha
Helix 16	AB7	C	90	98	Right-handed alpha
Helix 17	AB8	C	99	105	Right-handed 310
Helix 18	AB9	C	209	211	Right-handed 310
Helix 19	AC1	C	230	234	Right-handed alpha
Helix 20	AC2	C	235	237	Right-handed 310
Helix 21	AC3	D	46	51	Right-handed alpha
Helix 22	AC4	D	55	66	Right-handed alpha
Helix 23	AC5	D	90	98	Right-handed alpha
Helix 24	AC6	D	99	105	Right-handed 310
Helix 25	AC7	D	209	211	Right-handed 310
Helix 26	AC8	D	230	234	Right-handed alpha
Helix 27	AC9	D	235	237	Right-handed 310
Helix 28	AD1	E	55	66	Right-handed alpha
Helix 29	AD2	E	90	98	Right-handed alpha
Helix 30	AD3	E	99	105	Right-handed 310
Helix 31	AD4	E	209	211	Right-handed 310
Helix 32	AD5	E	230	234	Right-handed alpha
Helix 33	AD6	E	235	237	Right-handed 310

There are 30 sheets in PDB entry 36GK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	74	first strand
Strand 2	A	38	45	anti-parallel
Strand 3	A	114	124	anti-parallel
Strand 4	A	171	181	anti-parallel
Strand 5	A	139	143	anti-parallel
Strand 6	A	146	151	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	74	first strand
Strand 2	A	38	45	anti-parallel
Strand 3	A	114	124	anti-parallel
Strand 4	A	213	214	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	80	first strand
Strand 2	A	187	194	anti-parallel
Strand 3	A	127	136	anti-parallel
Strand 4	A	165	167	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	127	136	anti-parallel
Strand 3	A	187	194	anti-parallel
Strand 4	A	206	207	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	221	first strand
Strand 2	A	294	304	parallel
Strand 3	A	279	288	anti-parallel
Strand 4	A	247	248	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	229	first strand
Strand 2	A	268	273	anti-parallel
Strand 3	A	258	262	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	74	first strand
Strand 2	B	38	45	anti-parallel
Strand 3	B	114	124	anti-parallel
Strand 4	B	171	181	anti-parallel
Strand 5	B	139	143	anti-parallel
Strand 6	B	146	151	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	74	first strand
Strand 2	B	38	45	anti-parallel
Strand 3	B	114	124	anti-parallel
Strand 4	B	213	214	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	187	194	anti-parallel
Strand 3	B	127	136	anti-parallel
Strand 4	B	165	167	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	161	first strand
Strand 2	B	127	136	anti-parallel
Strand 3	B	187	194	anti-parallel
Strand 4	B	206	207	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	221	first strand
Strand 2	B	294	304	parallel
Strand 3	B	280	288	anti-parallel
Strand 4	B	247	248	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	229	first strand
Strand 2	B	268	273	anti-parallel
Strand 3	B	258	262	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	74	first strand
Strand 2	C	38	45	anti-parallel
Strand 3	C	114	124	anti-parallel
Strand 4	C	171	181	anti-parallel
Strand 5	C	139	143	anti-parallel
Strand 6	C	146	151	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	74	first strand
Strand 2	C	38	45	anti-parallel
Strand 3	C	114	124	anti-parallel
Strand 4	C	213	215	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	187	194	anti-parallel
Strand 3	C	127	136	anti-parallel
Strand 4	C	165	167	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	161	first strand
Strand 2	C	127	136	anti-parallel
Strand 3	C	187	194	anti-parallel
Strand 4	C	206	207	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	219	221	first strand
Strand 2	C	294	304	parallel
Strand 3	C	280	288	anti-parallel
Strand 4	C	247	248	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	226	229	first strand
Strand 2	C	268	273	anti-parallel
Strand 3	C	258	262	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	74	first strand
Strand 2	D	38	45	anti-parallel
Strand 3	D	114	124	anti-parallel
Strand 4	D	171	181	anti-parallel
Strand 5	D	139	143	anti-parallel
Strand 6	D	146	151	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	74	first strand
Strand 2	D	38	45	anti-parallel
Strand 3	D	114	124	anti-parallel
Strand 4	D	213	215	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	80	first strand
Strand 2	D	187	194	anti-parallel
Strand 3	D	127	136	anti-parallel
Strand 4	D	165	167	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	127	136	anti-parallel
Strand 3	D	187	194	anti-parallel
Strand 4	D	206	207	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	221	first strand
Strand 2	D	294	304	parallel
Strand 3	D	280	288	anti-parallel
Strand 4	D	247	248	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	226	229	first strand
Strand 2	D	268	273	anti-parallel
Strand 3	D	258	262	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	74	first strand
Strand 2	E	38	45	anti-parallel
Strand 3	E	114	124	anti-parallel
Strand 4	E	171	181	anti-parallel
Strand 5	E	139	143	anti-parallel
Strand 6	E	146	151	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	74	first strand
Strand 2	E	38	45	anti-parallel
Strand 3	E	114	124	anti-parallel
Strand 4	E	213	214	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	80	first strand
Strand 2	E	187	194	anti-parallel
Strand 3	E	127	136	anti-parallel
Strand 4	E	165	167	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	127	136	anti-parallel
Strand 3	E	187	194	anti-parallel
Strand 4	E	206	207	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	219	221	first strand
Strand 2	E	294	304	parallel
Strand 3	E	280	288	anti-parallel
Strand 4	E	247	248	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	226	229	first strand
Strand 2	E	268	273	anti-parallel
Strand 3	E	258	262	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 36GK

Analysis of interatomic Contacts of Structural Units in PDB entry:
36GK