Analysis of interatomic Contacts of Structural Units in PDB entry:
36GY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 36GY entry

There are 3 chains in PDB entry 36GY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 41
A
 SER 43HIS 385
B
 MET 1GLU 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 36GY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed 310
Helix 2
AA2
A
16 34Right-handed alpha
Helix 3
AA3
A
40 44Right-handed 310
Helix 4
AA4
A
46 48Right-handed 310
Helix 5
AA5
A
49 54Right-handed alpha
Helix 6
AA6
A
64 74Right-handed alpha
Helix 7
AA7
A
90 97Right-handed alpha
Helix 8
AA8
A
105 120Right-handed alpha
Helix 9
AA9
A
153 157Right-handed 310
Helix 10
AB1
A
177 193Right-handed alpha
Helix 11
AB2
A
194 199Right-handed 310
Helix 12
AB3
A
216 231Right-handed alpha
Helix 13
AB4
A
241 246Right-handed alpha
Helix 14
AB5
A
272 277Right-handed alpha
Helix 15
AB6
A
277 283Right-handed alpha
Helix 16
AB7
A
339 343Right-handed 310
Helix 17
AB8
A
345 349Right-handed 310
Helix 18
AB9
A
370 379Right-handed alpha
Helix 19
AC1
B
3 7Right-handed 310
Helix 20
AC2
B
16 34Right-handed alpha
Helix 21
AC3
B
42 44Right-handed 310
Helix 22
AC4
B
46 48Right-handed 310
Helix 23
AC5
B
49 55Right-handed alpha
Helix 24
AC6
B
64 74Right-handed alpha
Helix 25
AC7
B
90 97Right-handed alpha
Helix 26
AC8
B
105 120Right-handed alpha
Helix 27
AC9
B
153 157Right-handed 310
Helix 28
AD1
B
177 193Right-handed alpha
Helix 29
AD2
B
194 199Right-handed 310
Helix 30
AD3
B
216 231Right-handed alpha
Helix 31
AD4
B
241 246Right-handed alpha
Helix 32
AD5
B
272 277Right-handed alpha
Helix 33
AD6
B
277 283Right-handed alpha
Helix 34
AD7
B
339 343Right-handed 310
Helix 35
AD8
B
345 349Right-handed 310
Helix 36
AD9
B
370 376Right-handed alpha
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There are 6 sheets in PDB entry 36GY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
314 320anti-parallel
Strand 3
A
300 305anti-parallel
Strand 4
A
264 269parallel
Strand 5
A
249 261anti-parallel
Strand 6
A
329 333anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
314 320anti-parallel
Strand 3
A
300 305anti-parallel
Strand 4
A
264 269parallel
Strand 5
A
249 261anti-parallel
Strand 6
A
11 15anti-parallel
Strand 7
A
353 357parallel
Strand 8
A
363 367anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
235 238parallel
Strand 3
A
201 203parallel
Strand 4
A
165 169parallel
Strand 5
A
124 128parallel
Strand 6
A
98 103parallel
Strand 7
A
79 82parallel
Strand 8
A
61 62parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 294first strand
Strand 2
B
314 320anti-parallel
Strand 3
B
300 305anti-parallel
Strand 4
B
264 269parallel
Strand 5
B
249 261anti-parallel
Strand 6
B
329 333anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 294first strand
Strand 2
B
314 320anti-parallel
Strand 3
B
300 305anti-parallel
Strand 4
B
264 269parallel
Strand 5
B
249 261anti-parallel
Strand 6
B
11 15anti-parallel
Strand 7
B
353 357parallel
Strand 8
B
363 367anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 37first strand
Strand 2
B
235 238parallel
Strand 3
B
201 203parallel
Strand 4
B
165 169parallel
Strand 5
B
124 128parallel
Strand 6
B
98 103parallel
Strand 7
B
79 82parallel
Strand 8
B
60 62parallel
Strand 9
B
39 40parallel
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