Analysis of interatomic Contacts of Structural Units in PDB entry:
36JA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 36JA entry

There is 1 chain in PDB entry 36JA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1TYR 2196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 36JA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
105 110Right-handed 310
Helix 3
AA3
A
151 156Right-handed alpha
Helix 4
AA4
A
284 290Right-handed alpha
Helix 5
AA5
A
384 389Right-handed alpha
Helix 6
AA6
A
460 464Right-handed 310
Helix 7
AA7
A
482 489Right-handed alpha
Helix 8
AA8
A
526 528Right-handed 310
Helix 9
AA9
A
1543 1548Right-handed alpha
Helix 10
AB1
A
1610 1614Right-handed 310
Helix 11
AB2
A
1650 1654Right-handed 310
Helix 12
AB3
A
1663 1667Right-handed 310
Helix 13
AB4
A
1685 1689Right-handed 310
Helix 14
AB5
A
1707 1714Right-handed alpha
Helix 15
AB6
A
1751 1753Right-handed 310
Helix 16
AB7
A
1860 1865Right-handed alpha
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There are 19 sheets in PDB entry 36JA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
69 75parallel
Strand 3
A
119 125anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
33 37anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
159 162anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
202 206anti-parallel
Strand 3
A
181 191anti-parallel
Strand 4
A
224 233parallel
Strand 5
A
264 271anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 220first strand
Strand 2
A
293 299parallel
Strand 3
A
276 282anti-parallel
Strand 4
A
238 243anti-parallel
Strand 5
A
258 261anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
253 255anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 371first strand
Strand 2
A
323 334anti-parallel
Strand 3
A
402 409parallel
Strand 4
A
451 458anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 398first strand
Strand 2
A
493 498parallel
Strand 3
A
473 478anti-parallel
Strand 4
A
418 419anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
557 561first strand
Strand 2
A
514 524anti-parallel
Strand 3
A
579 588parallel
Strand 4
A
621 626anti-parallel
Strand 5
A
603 605anti-parallel
Strand 6
A
608 610anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
572 575first strand
Strand 2
A
648 654parallel
Strand 3
A
631 637anti-parallel
Strand 4
A
594 598anti-parallel
Strand 5
A
612 615anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1586 1594first strand
Strand 2
A
1555 1564anti-parallel
Strand 3
A
1631 1634parallel
Strand 4
A
1677 1678anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1620 1622first strand
Strand 2
A
1718 1723parallel
Strand 3
A
1697 1703anti-parallel
Strand 4
A
1643 1644anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1627 1629first strand
Strand 2
A
1681 1683anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1776 1780first strand
Strand 2
A
1739 1749anti-parallel
Strand 3
A
1797 1804parallel
Strand 4
A
1840 1847anti-parallel
Strand 5
A
1820 1823anti-parallel
Strand 6
A
1829 1831anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1791 1792first strand
Strand 2
A
1871 1874parallel
Strand 3
A
1852 1858anti-parallel
Strand 4
A
1812 1816anti-parallel
Strand 5
A
1834 1836anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1968 1969first strand
Strand 2
A
1977 1978anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2040 2041first strand
Strand 2
A
2191 2192anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2095 2098first strand
Strand 2
A
2172 2177anti-parallel
Strand 3
A
2125 2129anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2107 2108first strand
Strand 2
A
2162 2163anti-parallel
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