Analysis of interatomic Contacts of Structural Units in PDB entry:
36JK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 36JK entry

There is 1 chain in PDB entry 36JK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1TYR 2332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 36JK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 70Right-handed 310
Helix 2
AA2
A
107 110Right-handed 310
Helix 3
AA3
A
119 123Right-handed 310
Helix 4
AA4
A
163 169Right-handed alpha
Helix 5
AA5
A
407 413Right-handed alpha
Helix 6
AA6
A
443 447Right-handed 310
Helix 7
AA7
A
538 544Right-handed alpha
Helix 8
AA8
A
586 595Right-handed alpha
Helix 9
AA9
A
605 610Right-handed alpha
Helix 10
AB1
A
694 700Right-handed alpha
Helix 11
AB2
A
1752 1757Right-handed 310
Helix 12
AB3
A
1886 1888Right-handed 310
Helix 13
AB4
A
1890 1899Right-handed alpha
Helix 14
AB5
A
2002 2009Right-handed alpha
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There are 19 sheets in PDB entry 36JK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 53first strand
Strand 2
A
3 14anti-parallel
Strand 3
A
82 90parallel
Strand 4
A
133 140anti-parallel
Strand 5
A
104 105anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
176 179parallel
Strand 3
A
153 156anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 234first strand
Strand 2
A
195 203anti-parallel
Strand 3
A
253 260parallel
Strand 4
A
292 298anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 248first strand
Strand 2
A
323 327parallel
Strand 3
A
304 310anti-parallel
Strand 4
A
267 271anti-parallel
Strand 5
A
286 288anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 384first strand
Strand 2
A
460 465parallel
Strand 3
A
509 514anti-parallel
Strand 4
A
483 485anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 394first strand
Strand 2
A
422 427anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
438 439anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 477first strand
Strand 2
A
528 535anti-parallel
Strand 3
A
548 554anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 617first strand
Strand 2
A
572 580anti-parallel
Strand 3
A
635 640parallel
Strand 4
A
676 680anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 629first strand
Strand 2
A
703 708parallel
Strand 3
A
686 692anti-parallel
Strand 4
A
649 653anti-parallel
Strand 5
A
667 670anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1730 1738first strand
Strand 2
A
1696 1707anti-parallel
Strand 3
A
1770 1777parallel
Strand 4
A
1811 1818anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1832 1838first strand
Strand 2
A
1852 1858anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1917 1921first strand
Strand 2
A
1874 1884anti-parallel
Strand 3
A
1940 1946parallel
Strand 4
A
1984 1988anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1933 1935first strand
Strand 2
A
2011 2017parallel
Strand 3
A
1994 2000anti-parallel
Strand 4
A
1954 1958anti-parallel
Strand 5
A
1977 1978anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1963 1966first strand
Strand 2
A
1970 1973anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2023 2024first strand
Strand 2
A
2165 2170anti-parallel
Strand 3
A
2079 2086anti-parallel
Strand 4
A
2136 2144anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2037 2039first strand
Strand 2
A
2071 2074anti-parallel
Strand 3
A
2148 2157anti-parallel
Strand 4
A
2097 2106anti-parallel
Strand 5
A
2113 2114anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2037 2039first strand
Strand 2
A
2071 2074anti-parallel
Strand 3
A
2148 2157anti-parallel
Strand 4
A
2097 2106anti-parallel
Strand 5
A
2126 2127anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2238 2240first strand
Strand 2
A
2301 2303anti-parallel
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