Analysis of interatomic Contacts of Structural Units in PDB entry:
36LW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 36LW entry

There are 2 chains in PDB entry 36LW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7PRO 499
B
 LEU 11PRO 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 36LW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 33Right-handed alpha
Helix 2
AA2
A
46 54Right-handed alpha
Helix 3
AA3
A
58 66Right-handed alpha
Helix 4
AA4
A
102 110Right-handed alpha
Helix 5
AA5
A
161 165Right-handed alpha
Helix 6
AA6
A
165 173Right-handed alpha
Helix 7
AA7
A
173 197Right-handed alpha
Helix 8
AA8
A
236 246Right-handed alpha
Helix 9
AA9
A
282 303Right-handed alpha
Helix 10
AB1
A
325 333Right-handed alpha
Helix 11
AB2
A
337 342Right-handed alpha
Helix 12
AB3
A
343 355Right-handed alpha
Helix 13
AB4
A
363 376Right-handed alpha
Helix 14
AB5
A
377 380Right-handed 310
Helix 15
AB6
A
392 394Right-handed 310
Helix 16
AB7
A
428 441Right-handed alpha
Helix 17
AB8
A
448 453Right-handed 310
Helix 18
AB9
A
454 464Right-handed alpha
Helix 19
AC1
A
475 484Right-handed alpha
Helix 20
AC2
A
487 491Right-handed 310
Helix 21
AC3
B
12 33Right-handed alpha
Helix 22
AC4
B
46 54Right-handed alpha
Helix 23
AC5
B
58 66Right-handed alpha
Helix 24
AC6
B
102 110Right-handed alpha
Helix 25
AC7
B
161 165Right-handed alpha
Helix 26
AC8
B
165 173Right-handed alpha
Helix 27
AC9
B
173 197Right-handed alpha
Helix 28
AD1
B
236 246Right-handed alpha
Helix 29
AD2
B
282 303Right-handed alpha
Helix 30
AD3
B
325 333Right-handed alpha
Helix 31
AD4
B
337 342Right-handed alpha
Helix 32
AD5
B
343 355Right-handed alpha
Helix 33
AD6
B
363 376Right-handed alpha
Helix 34
AD7
B
377 380Right-handed 310
Helix 35
AD8
B
392 394Right-handed 310
Helix 36
AD9
B
428 441Right-handed alpha
Helix 37
AE1
B
454 464Right-handed alpha
Helix 38
AE2
B
475 484Right-handed alpha
Helix 39
AE3
B
487 491Right-handed 310
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There are 8 sheets in PDB entry 36LW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 79first strand
Strand 2
A
82 86anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
132 143parallel
Strand 5
A
117 126anti-parallel
Strand 6
A
68 79anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
250 258parallel
Strand 3
A
270 279anti-parallel
Strand 4
A
468 474anti-parallel
Strand 5
A
417 424anti-parallel
Strand 6
A
406 414anti-parallel
Strand 7
A
384 390anti-parallel
Strand 8
A
321 324parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
228 232anti-parallel
Strand 3
A
220 223anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
312 315anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 79first strand
Strand 2
B
82 86anti-parallel
Strand 3
B
91 95anti-parallel
Strand 4
B
132 143parallel
Strand 5
B
117 126anti-parallel
Strand 6
B
68 79anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
250 258parallel
Strand 3
B
270 279anti-parallel
Strand 4
B
468 474anti-parallel
Strand 5
B
417 424anti-parallel
Strand 6
B
406 414anti-parallel
Strand 7
B
384 390anti-parallel
Strand 8
B
321 324parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
228 232anti-parallel
Strand 3
B
220 223anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 309first strand
Strand 2
B
312 315anti-parallel
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