Analysis of interatomic Contacts of Structural Units in PDB entry:
36RP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 36RP entry

There are 11 chains in PDB entry 36RP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 880
B	MET 1	GLY 1121
C	MET 1	ARG 393
G	LYS 2	LYS 123
H	LYS 7	GLY 84
K	MET 1	ILE 86
L	MET 1	ILE 90
N	MET 1	ILE 66
Y	VAL 38	ASP 81
D	PRO 2	ALA 262
P	ALA 2	ILE 48

There are108 helices in PDB entry 36RP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	21	Right-handed alpha
Helix 2	AA2	A	46	50	Right-handed 310
Helix 3	AA3	A	86	97	Right-handed alpha
Helix 4	AA4	A	107	124	Right-handed alpha
Helix 5	AA5	A	125	143	Right-handed alpha
Helix 6	AA6	A	176	186	Right-handed alpha
Helix 7	AA7	A	188	195	Right-handed alpha
Helix 8	AA8	A	233	256	Right-handed alpha
Helix 9	AA9	A	258	278	Right-handed alpha
Helix 10	AB1	A	307	312	Right-handed alpha
Helix 11	AB2	A	340	347	Right-handed alpha
Helix 12	AB3	A	357	367	Right-handed alpha
Helix 13	AB4	A	393	400	Right-handed alpha
Helix 14	AB5	A	426	428	Right-handed 310
Helix 15	AB6	A	446	448	Right-handed 310
Helix 16	AB7	A	449	454	Right-handed alpha
Helix 17	AB8	A	469	480	Right-handed alpha
Helix 18	AB9	A	482	486	Right-handed 310
Helix 19	AC1	A	501	510	Right-handed alpha
Helix 20	AC2	A	517	528	Right-handed alpha
Helix 21	AC3	A	548	554	Right-handed alpha
Helix 22	AC4	A	599	604	Right-handed alpha
Helix 23	AC5	A	610	643	Right-handed alpha
Helix 24	AC6	A	647	651	Right-handed 310
Helix 25	AC7	A	654	681	Right-handed alpha
Helix 26	AC8	A	691	719	Right-handed alpha
Helix 27	AC9	A	723	732	Right-handed alpha
Helix 28	AD1	A	736	745	Right-handed alpha
Helix 29	AD2	A	775	779	Right-handed 310
Helix 30	AD3	A	791	808	Right-handed alpha
Helix 31	AD4	A	816	826	Right-handed alpha
Helix 32	AD5	A	867	877	Right-handed alpha
Helix 33	AD6	B	3	18	Right-handed alpha
Helix 34	AD7	B	21	34	Right-handed alpha
Helix 35	AD8	B	34	44	Right-handed alpha
Helix 36	AD9	B	79	86	Right-handed alpha
Helix 37	AE1	B	132	139	Right-handed alpha
Helix 38	AE2	B	221	228	Right-handed alpha
Helix 39	AE3	B	232	241	Right-handed alpha
Helix 40	AE4	B	243	256	Right-handed alpha
Helix 41	AE5	B	262	275	Right-handed alpha
Helix 42	AE6	B	279	295	Right-handed alpha
Helix 43	AE7	B	302	304	Right-handed 310
Helix 44	AE8	B	305	326	Right-handed alpha
Helix 45	AE9	B	343	374	Right-handed alpha
Helix 46	AF1	B	385	399	Right-handed alpha
Helix 47	AF2	B	416	424	Right-handed alpha
Helix 48	AF3	B	479	491	Right-handed alpha
Helix 49	AF4	B	495	503	Right-handed alpha
Helix 50	AF5	B	509	514	Right-handed alpha
Helix 51	AF6	B	530	544	Right-handed alpha
Helix 52	AF7	B	588	597	Right-handed alpha
Helix 53	AF8	B	601	608	Right-handed alpha
Helix 54	AF9	B	617	622	Right-handed 310
Helix 55	AG1	B	649	653	Right-handed 310
Helix 56	AG2	B	655	659	Right-handed 310
Helix 57	AG3	B	660	671	Right-handed alpha
Helix 58	AG4	B	740	746	Right-handed alpha
Helix 59	AG5	B	785	790	Right-handed 310
Helix 60	AG6	B	911	917	Right-handed alpha
Helix 61	AG7	B	919	935	Right-handed alpha
Helix 62	AG8	B	948	959	Right-handed alpha
Helix 63	AG9	B	996	1000	Right-handed 310
Helix 64	AH1	B	1028	1039	Right-handed alpha
Helix 65	AH2	B	1040	1049	Right-handed alpha
Helix 66	AH3	B	1094	1105	Right-handed alpha
Helix 67	AH4	C	3	17	Right-handed alpha
Helix 68	AH5	C	22	35	Right-handed alpha
Helix 69	AH6	C	42	59	Right-handed alpha
Helix 70	AH7	C	67	78	Right-handed alpha
Helix 71	AH8	C	79	82	Right-handed 310
Helix 72	AH9	C	101	111	Right-handed alpha
Helix 73	AI1	C	125	130	Right-handed alpha
Helix 74	AI2	C	131	144	Right-handed alpha
Helix 75	AI3	C	146	150	Right-handed alpha
Helix 76	AI4	C	168	176	Right-handed alpha
Helix 77	AI5	C	179	188	Right-handed alpha
Helix 78	AI6	C	216	226	Right-handed alpha
Helix 79	AI7	C	256	262	Right-handed 310
Helix 80	AI8	C	274	278	Right-handed 310
Helix 81	AI9	C	284	286	Right-handed 310
Helix 82	AJ1	C	287	303	Right-handed alpha
Helix 83	AJ2	C	307	319	Right-handed alpha
Helix 84	AJ3	C	338	346	Right-handed alpha
Helix 85	AJ4	C	349	359	Right-handed alpha
Helix 86	AJ5	C	367	373	Right-handed alpha
Helix 87	AJ6	H	24	35	Right-handed alpha
Helix 88	AJ7	H	38	42	Right-handed 310
Helix 89	AJ8	H	51	56	Right-handed alpha
Helix 90	AJ9	K	4	15	Right-handed alpha
Helix 91	AK1	K	19	36	Right-handed alpha
Helix 92	AK2	K	51	62	Right-handed alpha
Helix 93	AK3	L	21	34	Right-handed alpha
Helix 94	AK4	L	64	90	Right-handed alpha
Helix 95	AK5	N	14	16	Right-handed 310
Helix 96	AK6	N	17	26	Right-handed alpha
Helix 97	AK7	N	30	38	Right-handed alpha
Helix 98	AK8	N	42	51	Right-handed alpha
Helix 99	AK9	N	55	60	Right-handed alpha
Helix 100	AL1	Y	39	58	Right-handed alpha
Helix 101	AL2	Y	62	79	Right-handed alpha
Helix 102	AL3	D	21	35	Right-handed alpha
Helix 103	AL4	D	54	64	Right-handed alpha
Helix 104	AL5	D	71	76	Right-handed alpha
Helix 105	AL6	D	153	157	Right-handed 310
Helix 106	AL7	D	199	203	Right-handed 310
Helix 107	AL8	D	207	213	Right-handed alpha
Helix 108	AL9	D	237	261	Right-handed alpha

There are 46 sheets in PDB entry 36RP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	5	first strand
Strand 2	B	1087	1093	parallel
Strand 3	B	1054	1060	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	13	first strand
Strand 2	B	1108	1113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	81	first strand
Strand 2	A	209	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	151	152	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	158	first strand
Strand 2	A	164	168	anti-parallel
Strand 3	A	171	173	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	323	first strand
Strand 2	A	463	465	anti-parallel
Strand 3	A	416	420	anti-parallel
Strand 4	A	430	437	anti-parallel
Strand 5	A	336	339	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	328	first strand
Strand 2	A	443	445	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	352	first strand
Strand 2	A	406	410	anti-parallel
Strand 3	A	375	379	anti-parallel
Strand 4	A	385	387	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	516	first strand
Strand 2	A	546	547	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	562	565	first strand
Strand 2	A	585	589	anti-parallel
Strand 3	A	592	595	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	748	749	first strand
Strand 2	A	781	782	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	831	833	first strand
Strand 2	A	836	839	anti-parallel
Strand 3	A	845	847	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	54	56	anti-parallel
Strand 3	B	91	101	anti-parallel
Strand 4	B	60	62	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	54	56	anti-parallel
Strand 3	B	91	101	anti-parallel
Strand 4	B	110	118	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	68	first strand
Strand 2	B	75	77	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	152	first strand
Strand 2	B	155	159	anti-parallel
Strand 3	B	409	411	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	165	first strand
Strand 2	B	339	342	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	183	191	anti-parallel
Strand 3	B	194	202	anti-parallel
Strand 4	B	208	211	anti-parallel
Strand 5	B	219	220	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	426	427	first strand
Strand 2	B	466	467	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	573	581	anti-parallel
Strand 3	B	611	614	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	584	585	first strand
Strand 2	B	573	581	anti-parallel
Strand 3	B	637	638	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	493	494	first strand
Strand 2	B	523	528	anti-parallel
Strand 3	B	516	520	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	553	first strand
Strand 2	B	566	567	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	557	first strand
Strand 2	B	562	563	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	693	first strand
Strand 2	B	750	759	anti-parallel
Strand 3	B	858	865	anti-parallel
Strand 4	B	843	852	anti-parallel
Strand 5	B	801	802	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	693	first strand
Strand 2	B	750	759	anti-parallel
Strand 3	B	858	865	anti-parallel
Strand 4	B	843	852	anti-parallel
Strand 5	P	33	35	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	966	968	first strand
Strand 2	B	981	991	anti-parallel
Strand 3	B	875	878	anti-parallel
Strand 4	B	884	890	anti-parallel
Strand 5	B	736	739	parallel
Strand 6	B	906	908	anti-parallel
Strand 7	B	717	724	parallel
Strand 8	B	981	991	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	807	809	first strand
Strand 2	B	835	836	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	249	250	anti-parallel
Strand 3	C	239	240	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	157	first strand
Strand 2	C	162	167	anti-parallel
Strand 3	C	203	205	anti-parallel
Strand 4	C	197	198	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	194	first strand
Strand 2	C	208	209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	385	387	first strand
Strand 2	K	68	72	anti-parallel
Strand 3	K	78	82	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	10	first strand
Strand 2	G	51	57	anti-parallel
Strand 3	G	117	122	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	16	first strand
Strand 2	G	23	28	anti-parallel
Strand 3	G	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	74	first strand
Strand 2	G	89	90	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	78	79	first strand
Strand 2	G	85	87	anti-parallel
Strand 3	G	98	100	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	73	81	parallel
Strand 3	H	62	69	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	4	first strand
Strand 2	L	16	18	anti-parallel
Strand 3	L	52	54	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	38	40	first strand
Strand 2	L	58	59	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	17	first strand
Strand 2	D	217	232	anti-parallel
Strand 3	D	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	17	first strand
Strand 2	D	217	232	anti-parallel
Strand 3	D	164	172	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	41	first strand
Strand 2	D	137	148	anti-parallel
Strand 3	D	48	49	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	41	first strand
Strand 2	D	137	148	anti-parallel
Strand 3	D	94	102	anti-parallel
Strand 4	D	115	116	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	46	first strand
Strand 2	P	43	46	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	190	first strand
Strand 2	D	195	197	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 36RP

Analysis of interatomic Contacts of Structural Units in PDB entry:
36RP