Analysis of interatomic Contacts of Structural Units in PDB entry:
36WK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 36WK entry

There is 1 chain in PDB entry 36WK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR -8SER 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 36WK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-8 -2Right-handed alpha
Helix 2
AA2
A
19 24Right-handed 310
Helix 3
AA3
A
55 58Right-handed 310
Helix 4
AA4
A
65 73Right-handed alpha
Helix 5
AA5
A
74 85Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
92 100Right-handed alpha
Helix 8
AA8
A
101 104Right-handed 310
Helix 9
AA9
A
108 126Right-handed alpha
Helix 10
AB1
A
147 164Right-handed alpha
Helix 11
AB2
A
176 196Right-handed alpha
Helix 12
AB3
A
200 209Right-handed alpha
Helix 13
AB4
A
224 226Right-handed 310
Helix 14
AB5
A
249 263Right-handed alpha
Helix 15
AB6
A
265 293Right-handed alpha
Helix 16
AB7
A
297 325Right-handed alpha
Helix 17
AB8
A
329 342Right-handed alpha
Helix 18
AB9
A
367 383Right-handed alpha
Helix 19
AC1
A
400 405Right-handed alpha
Helix 20
AC2
A
407 420Right-handed alpha
Helix 21
AC3
A
424 433Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 36WK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
49 54anti-parallel
Strand 3
A
132 138parallel
Strand 4
A
27 43anti-parallel
Strand 5
A
211 214anti-parallel
Strand 6
A
228 231anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
49 54anti-parallel
Strand 3
A
132 138parallel
Strand 4
A
27 43anti-parallel
Strand 5
A
5 16anti-parallel
Strand 6
A
397 399anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
357 362anti-parallel
Strand 3
A
237 243anti-parallel
Strand 4
A
385 391anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il