Analysis of interatomic Contacts of Structural Units in PDB entry:
37BM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 37BM entry

There are 15 chains in PDB entry 37BM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 5	ASN 464
B	LEU 8	ARG 360
C	CYS 18	GLU 22
E	GLU 5	ASN 464
F	LEU 8	ARG 360
G	CYS 18	GLU 22
I	GLU 5	ASN 464
J	LEU 8	ARG 360
K	CYS 18	GLU 22
M	GLU 5	ASN 464
N	LEU 8	ARG 360
O	CYS 18	GLU 22
Q	GLU 5	ASN 464
R	LEU 8	ARG 360
S	CYS 18	GLU 22

There are215 helices in PDB entry 37BM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	15	Right-handed alpha
Helix 2	AA2	A	16	21	Right-handed 310
Helix 3	AA3	A	47	49	Right-handed 310
Helix 4	AA4	A	50	62	Right-handed alpha
Helix 5	AA5	A	64	68	Right-handed 310
Helix 6	AA6	A	69	80	Right-handed alpha
Helix 7	AA7	A	87	97	Right-handed alpha
Helix 8	AA8	A	142	154	Right-handed alpha
Helix 9	AA9	A	184	197	Right-handed alpha
Helix 10	AB1	A	205	214	Right-handed alpha
Helix 11	AB2	A	229	239	Right-handed alpha
Helix 12	AB3	A	258	263	Right-handed alpha
Helix 13	AB4	A	264	269	Right-handed 310
Helix 14	AB5	A	272	303	Right-handed alpha
Helix 15	AB6	A	304	308	Right-handed 310
Helix 16	AB7	A	309	321	Right-handed alpha
Helix 17	AB8	A	326	348	Right-handed alpha
Helix 18	AB9	A	349	354	Right-handed alpha
Helix 19	AC1	A	355	371	Right-handed alpha
Helix 20	AC2	A	375	390	Right-handed alpha
Helix 21	AC3	A	394	434	Right-handed alpha
Helix 22	AC4	A	443	449	Right-handed 310
Helix 23	AC5	B	11	24	Right-handed alpha
Helix 24	AC6	B	26	40	Right-handed alpha
Helix 25	AC7	B	43	70	Right-handed alpha
Helix 26	AC8	B	73	83	Right-handed alpha
Helix 27	AC9	B	83	117	Right-handed alpha
Helix 28	AD1	B	122	139	Right-handed alpha
Helix 29	AD2	B	140	167	Right-handed alpha
Helix 30	AD3	B	168	171	Right-handed 310
Helix 31	AD4	B	172	177	Right-handed 310
Helix 32	AD5	B	184	190	Right-handed alpha
Helix 33	AD6	B	190	196	Right-handed alpha
Helix 34	AD7	B	197	199	Right-handed 310
Helix 35	AD8	B	200	206	Right-handed 310
Helix 36	AD9	B	207	211	Right-handed 310
Helix 37	AE1	B	213	215	Right-handed 310
Helix 38	AE2	B	216	244	Right-handed alpha
Helix 39	AE3	B	244	249	Right-handed alpha
Helix 40	AE4	B	253	259	Right-handed alpha
Helix 41	AE5	B	272	303	Right-handed alpha
Helix 42	AE6	B	306	323	Right-handed alpha
Helix 43	AE7	B	327	360	Right-handed alpha
Helix 44	AE8	E	9	15	Right-handed alpha
Helix 45	AE9	E	16	21	Right-handed 310
Helix 46	AF1	E	47	49	Right-handed 310
Helix 47	AF2	E	50	62	Right-handed alpha
Helix 48	AF3	E	64	68	Right-handed 310
Helix 49	AF4	E	69	80	Right-handed alpha
Helix 50	AF5	E	87	97	Right-handed alpha
Helix 51	AF6	E	142	154	Right-handed alpha
Helix 52	AF7	E	184	197	Right-handed alpha
Helix 53	AF8	E	205	214	Right-handed alpha
Helix 54	AF9	E	229	239	Right-handed alpha
Helix 55	AG1	E	258	263	Right-handed alpha
Helix 56	AG2	E	264	269	Right-handed 310
Helix 57	AG3	E	272	303	Right-handed alpha
Helix 58	AG4	E	304	308	Right-handed 310
Helix 59	AG5	E	309	321	Right-handed alpha
Helix 60	AG6	E	326	348	Right-handed alpha
Helix 61	AG7	E	349	354	Right-handed alpha
Helix 62	AG8	E	355	371	Right-handed alpha
Helix 63	AG9	E	375	390	Right-handed alpha
Helix 64	AH1	E	394	434	Right-handed alpha
Helix 65	AH2	E	443	449	Right-handed 310
Helix 66	AH3	F	11	24	Right-handed alpha
Helix 67	AH4	F	26	40	Right-handed alpha
Helix 68	AH5	F	43	70	Right-handed alpha
Helix 69	AH6	F	73	83	Right-handed alpha
Helix 70	AH7	F	83	117	Right-handed alpha
Helix 71	AH8	F	122	139	Right-handed alpha
Helix 72	AH9	F	140	167	Right-handed alpha
Helix 73	AI1	F	168	171	Right-handed 310
Helix 74	AI2	F	172	177	Right-handed 310
Helix 75	AI3	F	184	190	Right-handed alpha
Helix 76	AI4	F	190	196	Right-handed alpha
Helix 77	AI5	F	197	199	Right-handed 310
Helix 78	AI6	F	200	206	Right-handed 310
Helix 79	AI7	F	207	211	Right-handed 310
Helix 80	AI8	F	213	215	Right-handed 310
Helix 81	AI9	F	216	244	Right-handed alpha
Helix 82	AJ1	F	244	249	Right-handed alpha
Helix 83	AJ2	F	253	259	Right-handed alpha
Helix 84	AJ3	F	272	303	Right-handed alpha
Helix 85	AJ4	F	306	323	Right-handed alpha
Helix 86	AJ5	F	327	360	Right-handed alpha
Helix 87	AJ6	I	9	15	Right-handed alpha
Helix 88	AJ7	I	16	21	Right-handed 310
Helix 89	AJ8	I	47	49	Right-handed 310
Helix 90	AJ9	I	50	62	Right-handed alpha
Helix 91	AK1	I	64	68	Right-handed 310
Helix 92	AK2	I	69	80	Right-handed alpha
Helix 93	AK3	I	87	97	Right-handed alpha
Helix 94	AK4	I	142	154	Right-handed alpha
Helix 95	AK5	I	184	197	Right-handed alpha
Helix 96	AK6	I	205	214	Right-handed alpha
Helix 97	AK7	I	229	239	Right-handed alpha
Helix 98	AK8	I	258	263	Right-handed alpha
Helix 99	AK9	I	264	269	Right-handed 310
Helix 100	AL1	I	272	303	Right-handed alpha
Helix 101	AL2	I	304	308	Right-handed 310
Helix 102	AL3	I	309	321	Right-handed alpha
Helix 103	AL4	I	326	348	Right-handed alpha
Helix 104	AL5	I	349	354	Right-handed alpha
Helix 105	AL6	I	355	371	Right-handed alpha
Helix 106	AL7	I	375	390	Right-handed alpha
Helix 107	AL8	I	394	434	Right-handed alpha
Helix 108	AL9	I	443	449	Right-handed 310
Helix 109	AM1	J	11	24	Right-handed alpha
Helix 110	AM2	J	26	40	Right-handed alpha
Helix 111	AM3	J	43	70	Right-handed alpha
Helix 112	AM4	J	73	83	Right-handed alpha
Helix 113	AM5	J	83	117	Right-handed alpha
Helix 114	AM6	J	122	139	Right-handed alpha
Helix 115	AM7	J	140	167	Right-handed alpha
Helix 116	AM8	J	168	171	Right-handed 310
Helix 117	AM9	J	172	177	Right-handed 310
Helix 118	AN1	J	184	190	Right-handed alpha
Helix 119	AN2	J	190	196	Right-handed alpha
Helix 120	AN3	J	197	199	Right-handed 310
Helix 121	AN4	J	200	206	Right-handed 310
Helix 122	AN5	J	207	211	Right-handed 310
Helix 123	AN6	J	213	215	Right-handed 310
Helix 124	AN7	J	216	244	Right-handed alpha
Helix 125	AN8	J	244	249	Right-handed alpha
Helix 126	AN9	J	253	259	Right-handed alpha
Helix 127	AO1	J	272	303	Right-handed alpha
Helix 128	AO2	J	306	323	Right-handed alpha
Helix 129	AO3	J	327	360	Right-handed alpha
Helix 130	AO4	M	9	15	Right-handed alpha
Helix 131	AO5	M	16	21	Right-handed 310
Helix 132	AO6	M	47	49	Right-handed 310
Helix 133	AO7	M	50	62	Right-handed alpha
Helix 134	AO8	M	64	68	Right-handed 310
Helix 135	AO9	M	69	80	Right-handed alpha
Helix 136	AP1	M	87	97	Right-handed alpha
Helix 137	AP2	M	142	154	Right-handed alpha
Helix 138	AP3	M	184	197	Right-handed alpha
Helix 139	AP4	M	205	214	Right-handed alpha
Helix 140	AP5	M	229	239	Right-handed alpha
Helix 141	AP6	M	258	263	Right-handed alpha
Helix 142	AP7	M	264	269	Right-handed 310
Helix 143	AP8	M	272	303	Right-handed alpha
Helix 144	AP9	M	304	308	Right-handed 310
Helix 145	AQ1	M	309	321	Right-handed alpha
Helix 146	AQ2	M	326	348	Right-handed alpha
Helix 147	AQ3	M	349	354	Right-handed alpha
Helix 148	AQ4	M	355	371	Right-handed alpha
Helix 149	AQ5	M	375	390	Right-handed alpha
Helix 150	AQ6	M	394	434	Right-handed alpha
Helix 151	AQ7	M	443	449	Right-handed 310
Helix 152	AQ8	N	11	24	Right-handed alpha
Helix 153	AQ9	N	26	40	Right-handed alpha
Helix 154	AR1	N	43	70	Right-handed alpha
Helix 155	AR2	N	73	83	Right-handed alpha
Helix 156	AR3	N	83	117	Right-handed alpha
Helix 157	AR4	N	122	139	Right-handed alpha
Helix 158	AR5	N	140	167	Right-handed alpha
Helix 159	AR6	N	168	171	Right-handed 310
Helix 160	AR7	N	172	177	Right-handed 310
Helix 161	AR8	N	184	190	Right-handed alpha
Helix 162	AR9	N	190	196	Right-handed alpha
Helix 163	AS1	N	197	199	Right-handed 310
Helix 164	AS2	N	200	206	Right-handed 310
Helix 165	AS3	N	207	211	Right-handed 310
Helix 166	AS4	N	213	215	Right-handed 310
Helix 167	AS5	N	216	244	Right-handed alpha
Helix 168	AS6	N	244	249	Right-handed alpha
Helix 169	AS7	N	253	259	Right-handed alpha
Helix 170	AS8	N	272	303	Right-handed alpha
Helix 171	AS9	N	306	323	Right-handed alpha
Helix 172	AT1	N	327	360	Right-handed alpha
Helix 173	AT2	Q	9	15	Right-handed alpha
Helix 174	AT3	Q	16	21	Right-handed 310
Helix 175	AT4	Q	47	49	Right-handed 310
Helix 176	AT5	Q	50	62	Right-handed alpha
Helix 177	AT6	Q	64	68	Right-handed 310
Helix 178	AT7	Q	69	80	Right-handed alpha
Helix 179	AT8	Q	87	97	Right-handed alpha
Helix 180	AT9	Q	142	154	Right-handed alpha
Helix 181	AU1	Q	184	197	Right-handed alpha
Helix 182	AU2	Q	205	214	Right-handed alpha
Helix 183	AU3	Q	229	239	Right-handed alpha
Helix 184	AU4	Q	258	263	Right-handed alpha
Helix 185	AU5	Q	264	269	Right-handed 310
Helix 186	AU6	Q	272	303	Right-handed alpha
Helix 187	AU7	Q	304	308	Right-handed 310
Helix 188	AU8	Q	309	321	Right-handed alpha
Helix 189	AU9	Q	326	348	Right-handed alpha
Helix 190	AV1	Q	349	354	Right-handed alpha
Helix 191	AV2	Q	355	371	Right-handed alpha
Helix 192	AV3	Q	375	390	Right-handed alpha
Helix 193	AV4	Q	394	434	Right-handed alpha
Helix 194	AV5	Q	443	449	Right-handed 310
Helix 195	AV6	R	11	24	Right-handed alpha
Helix 196	AV7	R	26	40	Right-handed alpha
Helix 197	AV8	R	43	70	Right-handed alpha
Helix 198	AV9	R	73	83	Right-handed alpha
Helix 199	AW1	R	83	117	Right-handed alpha
Helix 200	AW2	R	122	139	Right-handed alpha
Helix 201	AW3	R	140	167	Right-handed alpha
Helix 202	AW4	R	168	171	Right-handed 310
Helix 203	AW5	R	172	177	Right-handed 310
Helix 204	AW6	R	184	190	Right-handed alpha
Helix 205	AW7	R	190	196	Right-handed alpha
Helix 206	AW8	R	197	199	Right-handed 310
Helix 207	AW9	R	200	206	Right-handed 310
Helix 208	AX1	R	207	211	Right-handed 310
Helix 209	AX2	R	213	215	Right-handed 310
Helix 210	AX3	R	216	244	Right-handed alpha
Helix 211	AX4	R	244	249	Right-handed alpha
Helix 212	AX5	R	253	259	Right-handed alpha
Helix 213	AX6	R	272	303	Right-handed alpha
Helix 214	AX7	R	306	323	Right-handed alpha
Helix 215	AX8	R	327	360	Right-handed alpha

There are 15 sheets in PDB entry 37BM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	33	first strand
Strand 2	A	39	45	anti-parallel
Strand 3	A	100	104	anti-parallel
Strand 4	A	110	113	anti-parallel
Strand 5	A	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	166	first strand
Strand 2	A	172	179	anti-parallel
Strand 3	A	242	246	anti-parallel
Strand 4	A	252	255	anti-parallel
Strand 5	A	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	436	first strand
Strand 2	A	439	440	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	27	33	first strand
Strand 2	E	39	45	anti-parallel
Strand 3	E	100	104	anti-parallel
Strand 4	E	110	113	anti-parallel
Strand 5	E	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	166	first strand
Strand 2	E	172	179	anti-parallel
Strand 3	E	242	246	anti-parallel
Strand 4	E	252	255	anti-parallel
Strand 5	E	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	435	436	first strand
Strand 2	E	439	440	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	27	33	first strand
Strand 2	I	39	45	anti-parallel
Strand 3	I	100	104	anti-parallel
Strand 4	I	110	113	anti-parallel
Strand 5	I	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	159	166	first strand
Strand 2	I	172	179	anti-parallel
Strand 3	I	242	246	anti-parallel
Strand 4	I	252	255	anti-parallel
Strand 5	I	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	435	436	first strand
Strand 2	I	439	440	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	27	33	first strand
Strand 2	M	39	45	anti-parallel
Strand 3	M	100	104	anti-parallel
Strand 4	M	110	113	anti-parallel
Strand 5	M	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	159	166	first strand
Strand 2	M	172	179	anti-parallel
Strand 3	M	242	246	anti-parallel
Strand 4	M	252	255	anti-parallel
Strand 5	M	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	435	436	first strand
Strand 2	M	439	440	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	27	33	first strand
Strand 2	Q	39	45	anti-parallel
Strand 3	Q	100	104	anti-parallel
Strand 4	Q	110	113	anti-parallel
Strand 5	Q	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	159	166	first strand
Strand 2	Q	172	179	anti-parallel
Strand 3	Q	242	246	anti-parallel
Strand 4	Q	252	255	anti-parallel
Strand 5	Q	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	435	436	first strand
Strand 2	Q	439	440	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 37BM

Analysis of interatomic Contacts of Structural Units in PDB entry:
37BM