Analysis of interatomic Contacts of Structural Units in PDB entry:
37EP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 37EP entry

There is 1 chain in PDB entry 37EP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 49LYS 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 37EP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 97Right-handed alpha
Helix 2
AA2
A
101 106Right-handed alpha
Helix 3
AA3
A
117 128Right-handed alpha
Helix 4
AA4
A
144 155Right-handed alpha
Helix 5
AA5
A
164 187Right-handed alpha
Helix 6
AA6
A
199 204Right-handed alpha
Helix 7
AA7
A
210 214Right-handed 310
Helix 8
AA8
A
227 239Right-handed alpha
Helix 9
AA9
A
259 263Right-handed 310
Helix 10
AB1
A
267 271Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 37EP.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
157 162parallel
Strand 3
A
135 139parallel
Strand 4
A
217 221parallel
Strand 5
A
246 249parallel
Strand 6
A
291 298anti-parallel
Strand 7
A
272 279anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il