Analysis of interatomic Contacts of Structural Units in PDB entry:
37SN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 37SN entry

There is 1 chain in PDB entry 37SN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5VAL 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 37SN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 29Right-handed alpha
Helix 2
AA2
A
30 49Right-handed alpha
Helix 3
AA3
A
52 70Right-handed alpha
Helix 4
AA4
A
74 90Right-handed alpha
Helix 5
AA5
A
91 112Right-handed alpha
Helix 6
AA6
A
127 145Right-handed alpha
Helix 7
AA7
A
156 171Right-handed alpha
Helix 8
AA8
A
184 195Right-handed alpha
Helix 9
AA9
A
198 215Right-handed alpha
Helix 10
AB1
A
269 278Right-handed alpha
Helix 11
AB2
A
279 281Right-handed 310
Helix 12
AB3
A
342 344Right-handed 310
Helix 13
AB4
A
345 364Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 37SN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
148 154parallel
Strand 3
A
331 340anti-parallel
Strand 4
A
314 325anti-parallel
Strand 5
A
299 309anti-parallel
Strand 6
A
286 296anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 180first strand
Strand 2
A
244 251anti-parallel
Strand 3
A
234 241anti-parallel
Strand 4
A
258 266parallel
Strand 5
A
224 230anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il