Analysis of interatomic Contacts of Structural Units in PDB entry:
3A0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3A0F entry

There is 1 chain in PDB entry 3A0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3GLY 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3A0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
220 231Right-handed alpha
Helix 2
2
A
344 349Right-handed alpha
Helix 3
3
A
361 363Right-handed 310
Helix 4
4
A
371 376Right-handed 310
Helix 5
5
A
415 422Right-handed 310
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There are 15 sheets in PDB entry 3A0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
748 752anti-parallel
Strand 3
A
738 742anti-parallel
Strand 4
A
728 731anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
29 33anti-parallel
Strand 3
A
38 42anti-parallel
Strand 4
A
47 50anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
98 102anti-parallel
Strand 4
A
110 113anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
141 144anti-parallel
Strand 3
A
150 153anti-parallel
Strand 4
A
161 162anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 181first strand
Strand 2
A
189 193anti-parallel
Strand 3
A
199 202anti-parallel
Strand 4
A
210 211anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 246first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
268 273anti-parallel
Strand 4
A
280 282anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
341 343parallel
Strand 3
A
331 334anti-parallel
Strand 4
A
318 323anti-parallel
Strand 5
A
306 312anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
383 385anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
402 405anti-parallel
Strand 3
A
410 413anti-parallel
Strand 4
A
427 429anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 443first strand
Strand 2
A
453 456anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 488first strand
Strand 2
A
491 500anti-parallel
Strand 3
A
514 517anti-parallel
Strand 4
A
525 526anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 544first strand
Strand 2
A
551 554anti-parallel
Strand 3
A
564 566anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 588first strand
Strand 2
A
596 600anti-parallel
Strand 3
A
603 607anti-parallel
Strand 4
A
615 617anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 633first strand
Strand 2
A
641 645anti-parallel
Strand 3
A
649 653anti-parallel
Strand 4
A
661 662anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 678first strand
Strand 2
A
688 694anti-parallel
Strand 3
A
702 706anti-parallel
Strand 4
A
714 715anti-parallel
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