Analysis of interatomic Contacts of Structural Units in PDB entry:
3A0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3A0Z entry

There are 2 chains in PDB entry 3A0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 604ARG 755
B
 MET 604GLU 753
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3A0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
611 629Right-handed alpha
Helix 2
2
A
647 667Right-handed alpha
Helix 3
3
A
695 699Right-handed 310
Helix 4
4
A
700 704Right-handed 310
Helix 5
5
A
717 727Right-handed alpha
Helix 6
6
A
751 755Right-handed 310
Helix 7
7
B
611 629Right-handed alpha
Helix 8
8
B
647 667Right-handed alpha
Helix 9
9
B
695 699Right-handed 310
Helix 10
10
B
700 704Right-handed 310
Helix 11
11
B
716 727Right-handed alpha
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There are 4 sheets in PDB entry 3A0Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
607 610first strand
Strand 2
A
643 646anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
632 637first strand
Strand 2
A
671 678parallel
Strand 3
A
682 690anti-parallel
Strand 4
A
741 749anti-parallel
Strand 5
A
732 738anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
607 610first strand
Strand 2
B
643 646anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
632 637first strand
Strand 2
B
671 678parallel
Strand 3
B
682 690anti-parallel
Strand 4
B
741 749anti-parallel
Strand 5
B
732 738anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il