Analysis of interatomic Contacts of Structural Units in PDB entry:
3A6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3A6E entry

There are 6 chains in PDB entry 3A6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3PRO 259
B
 LYS 3PRO 259
C
 LYS 3PRO 259
D
 LYS 3PRO 259
E
 LYS 3PRO 259
F
 LYS 3PRO 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 3A6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
11 21Right-handed alpha
Helix 3
3
A
43 61Right-handed alpha
Helix 4
4
A
75 80Right-handed alpha
Helix 5
5
A
91 110Right-handed alpha
Helix 6
6
A
120 122Right-handed 310
Helix 7
7
A
123 141Right-handed alpha
Helix 8
8
A
154 157Right-handed 310
Helix 9
9
A
159 167Right-handed alpha
Helix 10
10
A
173 177Right-handed 310
Helix 11
11
A
180 191Right-handed alpha
Helix 12
12
A
192 195Right-handed 310
Helix 13
13
A
196 200Right-handed 310
Helix 14
14
A
217 221Right-handed 310
Helix 15
15
A
234 257Right-handed alpha
Helix 16
16
B
6 10Right-handed 310
Helix 17
17
B
11 21Right-handed alpha
Helix 18
18
B
43 61Right-handed alpha
Helix 19
19
B
75 80Right-handed alpha
Helix 20
20
B
91 110Right-handed alpha
Helix 21
21
B
120 122Right-handed 310
Helix 22
22
B
123 141Right-handed alpha
Helix 23
23
B
154 157Right-handed 310
Helix 24
24
B
159 167Right-handed alpha
Helix 25
25
B
173 177Right-handed 310
Helix 26
26
B
180 191Right-handed alpha
Helix 27
27
B
192 195Right-handed 310
Helix 28
28
B
196 200Right-handed 310
Helix 29
29
B
217 221Right-handed 310
Helix 30
30
B
234 257Right-handed alpha
Helix 31
31
C
6 10Right-handed 310
Helix 32
32
C
11 21Right-handed alpha
Helix 33
33
C
43 61Right-handed alpha
Helix 34
34
C
75 80Right-handed alpha
Helix 35
35
C
91 110Right-handed alpha
Helix 36
36
C
120 122Right-handed 310
Helix 37
37
C
123 141Right-handed alpha
Helix 38
38
C
154 157Right-handed 310
Helix 39
39
C
159 167Right-handed alpha
Helix 40
40
C
173 177Right-handed 310
Helix 41
41
C
180 191Right-handed alpha
Helix 42
42
C
192 195Right-handed 310
Helix 43
43
C
196 200Right-handed 310
Helix 44
44
C
217 221Right-handed 310
Helix 45
45
C
234 257Right-handed alpha
Helix 46
46
D
6 10Right-handed 310
Helix 47
47
D
11 20Right-handed alpha
Helix 48
48
D
43 61Right-handed alpha
Helix 49
49
D
75 80Right-handed alpha
Helix 50
50
D
91 110Right-handed alpha
Helix 51
51
D
120 122Right-handed 310
Helix 52
52
D
123 141Right-handed alpha
Helix 53
53
D
154 157Right-handed 310
Helix 54
54
D
159 167Right-handed alpha
Helix 55
55
D
173 177Right-handed 310
Helix 56
56
D
180 191Right-handed alpha
Helix 57
57
D
192 195Right-handed 310
Helix 58
58
D
196 200Right-handed 310
Helix 59
59
D
217 221Right-handed 310
Helix 60
60
D
234 257Right-handed alpha
Helix 61
61
E
6 10Right-handed 310
Helix 62
62
E
11 21Right-handed alpha
Helix 63
63
E
43 61Right-handed alpha
Helix 64
64
E
75 80Right-handed alpha
Helix 65
65
E
91 110Right-handed alpha
Helix 66
66
E
120 122Right-handed 310
Helix 67
67
E
123 141Right-handed alpha
Helix 68
68
E
154 157Right-handed 310
Helix 69
69
E
159 167Right-handed alpha
Helix 70
70
E
173 177Right-handed 310
Helix 71
71
E
180 191Right-handed alpha
Helix 72
72
E
192 195Right-handed 310
Helix 73
73
E
196 200Right-handed 310
Helix 74
74
E
217 221Right-handed 310
Helix 75
75
E
234 257Right-handed alpha
Helix 76
76
F
6 10Right-handed 310
Helix 77
77
F
11 21Right-handed alpha
Helix 78
78
F
43 61Right-handed alpha
Helix 79
79
F
75 80Right-handed alpha
Helix 80
80
F
91 110Right-handed alpha
Helix 81
81
F
120 122Right-handed 310
Helix 82
82
F
123 141Right-handed alpha
Helix 83
83
F
154 157Right-handed 310
Helix 84
84
F
159 167Right-handed alpha
Helix 85
85
F
173 177Right-handed 310
Helix 86
86
F
180 191Right-handed alpha
Helix 87
87
F
192 195Right-handed 310
Helix 88
88
F
196 200Right-handed 310
Helix 89
89
F
217 221Right-handed 310
Helix 90
90
F
234 257Right-handed alpha
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There are 6 sheets in PDB entry 3A6E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
26 30parallel
Strand 3
A
113 118parallel
Strand 4
A
147 152parallel
Strand 5
B
212 214anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
B
147 152anti-parallel
Strand 3
B
113 118parallel
Strand 4
B
26 30parallel
Strand 5
B
63 64parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 64first strand
Strand 2
C
26 30parallel
Strand 3
C
113 118parallel
Strand 4
C
147 152parallel
Strand 5
D
212 214anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
212 214first strand
Strand 2
D
147 152anti-parallel
Strand 3
D
113 118parallel
Strand 4
D
26 30parallel
Strand 5
D
63 64parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
63 64first strand
Strand 2
E
26 30parallel
Strand 3
E
113 118parallel
Strand 4
E
147 152parallel
Strand 5
F
212 214anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
212 214first strand
Strand 2
F
147 152anti-parallel
Strand 3
F
113 118parallel
Strand 4
F
26 30parallel
Strand 5
F
63 64parallel
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