Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 3A7O entry
There are 6 chains in PDB entry 3A7O
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
HIS 60 | SER 118 |
B
|
ASP 61 | GLN 114 |
C
|
HIS 60 | VAL 112 |
D
|
SER 59 | LYS 116 |
E
|
HIS 60 | ASP 119 |
F
|
ASP 61 | SER 118 |
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There are 6
helices in PDB entry 3A7O. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 60 |
118 | Right-handed alpha |
| Helix 2 |
2 | B
| 61 |
113 | Right-handed alpha |
| Helix 3 |
3 | C
| 60 |
109 | Right-handed alpha |
| Helix 4 |
4 | D
| 59 |
116 | Right-handed alpha |
| Helix 5 |
5 | E
| 60 |
119 | Right-handed alpha |
| Helix 6 |
6 | F
| 61 |
117 | Right-handed alpha |
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There are no sheets in PDB entry
3A7O
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il