Analysis of interatomic Contacts of Structural Units in PDB entry:
3A8T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3A8T entry

There is 1 chain in PDB entry 3A8T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28GLU 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3A8T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 52Right-handed alpha
Helix 2
2
A
79 83Right-handed 310
Helix 3
3
A
94 98Right-handed 310
Helix 4
4
A
101 119Right-handed alpha
Helix 5
5
A
129 138Right-handed alpha
Helix 6
6
A
173 192Right-handed alpha
Helix 7
7
A
192 201Right-handed alpha
Helix 8
8
A
211 215Right-handed 310
Helix 9
9
A
216 221Right-handed 310
Helix 10
10
A
223 234Right-handed alpha
Helix 11
11
A
246 280Right-handed alpha
Helix 12
12
A
291 300Right-handed alpha
Helix 13
13
A
304 315Right-handed alpha
Helix 14
14
A
315 329Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3A8T.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
56 60parallel
Strand 3
A
122 126parallel
Strand 4
A
31 36parallel
Strand 5
A
164 171parallel
Strand 6
A
286 290parallel
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