Analysis of interatomic Contacts of Structural Units in PDB entry:
3AAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AAW entry

There are 4 chains in PDB entry 3AAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 409
B
 MET 1GLY 160
C
 MET 1GLY 409
D
 MET 1GLY 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3AAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 14Right-handed 310
Helix 2
2
A
15 32Right-handed alpha
Helix 3
3
A
45 58Right-handed alpha
Helix 4
4
A
62 88Right-handed alpha
Helix 5
5
A
117 127Right-handed alpha
Helix 6
6
A
153 165Right-handed alpha
Helix 7
7
A
197 207Right-handed alpha
Helix 8
8
A
213 224Right-handed alpha
Helix 9
9
A
277 289Right-handed alpha
Helix 10
10
A
316 332Right-handed alpha
Helix 11
11
A
352 355Right-handed 310
Helix 12
12
A
359 371Right-handed alpha
Helix 13
13
A
393 405Right-handed alpha
Helix 14
14
B
28 40Right-handed alpha
Helix 15
15
B
69 80Right-handed alpha
Helix 16
16
B
104 107Right-handed 310
Helix 17
17
B
108 122Right-handed alpha
Helix 18
18
B
144 156Right-handed alpha
Helix 19
19
C
10 14Right-handed 310
Helix 20
20
C
15 32Right-handed alpha
Helix 21
21
C
45 58Right-handed alpha
Helix 22
22
C
62 88Right-handed alpha
Helix 23
23
C
117 127Right-handed alpha
Helix 24
24
C
153 165Right-handed alpha
Helix 25
25
C
197 207Right-handed alpha
Helix 26
26
C
213 223Right-handed alpha
Helix 27
27
C
244 248Right-handed 310
Helix 28
28
C
249 253Right-handed 310
Helix 29
29
C
277 289Right-handed alpha
Helix 30
30
C
316 333Right-handed alpha
Helix 31
31
C
352 355Right-handed 310
Helix 32
32
C
359 370Right-handed alpha
Helix 33
33
C
393 405Right-handed alpha
Helix 34
34
D
28 40Right-handed alpha
Helix 35
35
D
69 79Right-handed alpha
Helix 36
36
D
104 107Right-handed 310
Helix 37
37
D
108 122Right-handed alpha
Helix 38
38
D
144 157Right-handed alpha
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There are 8 sheets in PDB entry 3AAW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 95first strand
Strand 2
A
130 133parallel
Strand 3
A
35 40parallel
Strand 4
A
3 8parallel
Strand 5
A
169 174parallel
Strand 6
A
227 231parallel
Strand 7
A
239 241anti-parallel
Strand 8
A
195 196parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
B
4 12anti-parallel
Strand 3
B
95 103anti-parallel
Strand 4
B
135 141anti-parallel
Strand 5
B
128 131anti-parallel
Strand 6
A
294 298anti-parallel
Strand 7
A
307 315anti-parallel
Strand 8
A
264 273anti-parallel
Strand 9
A
337 341anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 261first strand
Strand 2
A
344 350anti-parallel
Strand 3
A
384 390anti-parallel
Strand 4
A
377 381anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
58 66anti-parallel
Strand 3
B
15 24anti-parallel
Strand 4
B
88 92anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 95first strand
Strand 2
C
130 133parallel
Strand 3
C
35 40parallel
Strand 4
C
3 8parallel
Strand 5
C
169 174parallel
Strand 6
C
227 231parallel
Strand 7
C
239 241anti-parallel
Strand 8
C
195 196parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 149first strand
Strand 2
D
4 12anti-parallel
Strand 3
D
95 103anti-parallel
Strand 4
D
135 141anti-parallel
Strand 5
D
128 132anti-parallel
Strand 6
C
294 298anti-parallel
Strand 7
C
307 315anti-parallel
Strand 8
C
264 273anti-parallel
Strand 9
C
337 341anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 261first strand
Strand 2
C
344 350anti-parallel
Strand 3
C
384 390anti-parallel
Strand 4
C
377 381anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 48first strand
Strand 2
D
58 66anti-parallel
Strand 3
D
15 24anti-parallel
Strand 4
D
88 92anti-parallel
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