Analysis of interatomic Contacts of Structural Units in PDB entry:
3ABZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ABZ entry

There are 4 chains in PDB entry 3ABZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LEU 845
B	SER 2	LEU 845
C	SER 2	LEU 845
D	SER 2	LEU 845

There are 99 helices in PDB entry 3ABZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	13	Right-handed alpha
Helix 2	2	A	14	22	Right-handed alpha
Helix 3	3	A	33	37	Right-handed 310
Helix 4	4	A	66	73	Right-handed alpha
Helix 5	5	A	75	93	Right-handed alpha
Helix 6	6	A	113	117	Right-handed 310
Helix 7	7	A	121	139	Right-handed alpha
Helix 8	8	A	165	172	Right-handed alpha
Helix 9	9	A	174	185	Right-handed alpha
Helix 10	10	A	204	209	Right-handed alpha
Helix 11	11	A	232	239	Right-handed alpha
Helix 12	12	A	252	262	Right-handed alpha
Helix 13	13	A	267	288	Right-handed alpha
Helix 14	14	A	288	293	Right-handed alpha
Helix 15	15	A	306	321	Right-handed alpha
Helix 16	16	A	366	376	Right-handed alpha
Helix 17	17	A	394	398	Right-handed 310
Helix 18	18	A	559	573	Right-handed alpha
Helix 19	19	A	602	614	Right-handed alpha
Helix 20	20	A	631	635	Right-handed 310
Helix 21	21	A	647	657	Right-handed alpha
Helix 22	22	A	673	677	Right-handed 310
Helix 23	23	A	699	707	Right-handed alpha
Helix 24	24	A	796	801	Right-handed alpha
Helix 25	25	B	5	13	Right-handed alpha
Helix 26	26	B	14	22	Right-handed alpha
Helix 27	27	B	33	37	Right-handed 310
Helix 28	28	B	66	72	Right-handed alpha
Helix 29	29	B	75	92	Right-handed alpha
Helix 30	30	B	113	117	Right-handed 310
Helix 31	31	B	121	139	Right-handed alpha
Helix 32	32	B	165	172	Right-handed alpha
Helix 33	33	B	174	185	Right-handed alpha
Helix 34	34	B	204	209	Right-handed alpha
Helix 35	35	B	232	239	Right-handed alpha
Helix 36	36	B	252	262	Right-handed alpha
Helix 37	37	B	267	288	Right-handed alpha
Helix 38	38	B	288	293	Right-handed alpha
Helix 39	39	B	306	321	Right-handed alpha
Helix 40	40	B	366	376	Right-handed alpha
Helix 41	41	B	394	398	Right-handed 310
Helix 42	42	B	421	425	Right-handed 310
Helix 43	43	B	559	573	Right-handed alpha
Helix 44	44	B	602	614	Right-handed alpha
Helix 45	45	B	631	635	Right-handed 310
Helix 46	46	B	647	657	Right-handed alpha
Helix 47	47	B	673	677	Right-handed 310
Helix 48	48	B	699	707	Right-handed alpha
Helix 49	49	B	796	801	Right-handed alpha
Helix 50	50	C	5	13	Right-handed alpha
Helix 51	51	C	14	21	Right-handed alpha
Helix 52	52	C	33	37	Right-handed 310
Helix 53	53	C	66	73	Right-handed alpha
Helix 54	54	C	75	93	Right-handed alpha
Helix 55	55	C	113	117	Right-handed 310
Helix 56	56	C	121	139	Right-handed alpha
Helix 57	57	C	165	172	Right-handed alpha
Helix 58	58	C	174	185	Right-handed alpha
Helix 59	59	C	204	209	Right-handed alpha
Helix 60	60	C	232	238	Right-handed alpha
Helix 61	61	C	252	262	Right-handed alpha
Helix 62	62	C	267	288	Right-handed alpha
Helix 63	63	C	288	293	Right-handed alpha
Helix 64	64	C	306	321	Right-handed alpha
Helix 65	65	C	366	376	Right-handed alpha
Helix 66	66	C	394	398	Right-handed 310
Helix 67	67	C	559	573	Right-handed alpha
Helix 68	68	C	602	614	Right-handed alpha
Helix 69	69	C	631	635	Right-handed 310
Helix 70	70	C	647	657	Right-handed alpha
Helix 71	71	C	673	677	Right-handed 310
Helix 72	72	C	699	707	Right-handed alpha
Helix 73	73	C	795	801	Right-handed alpha
Helix 74	74	D	5	13	Right-handed alpha
Helix 75	75	D	14	22	Right-handed alpha
Helix 76	76	D	33	37	Right-handed 310
Helix 77	77	D	66	73	Right-handed alpha
Helix 78	78	D	75	93	Right-handed alpha
Helix 79	79	D	113	117	Right-handed 310
Helix 80	80	D	121	139	Right-handed alpha
Helix 81	81	D	165	172	Right-handed alpha
Helix 82	82	D	174	185	Right-handed alpha
Helix 83	83	D	204	209	Right-handed alpha
Helix 84	84	D	232	239	Right-handed alpha
Helix 85	85	D	252	262	Right-handed alpha
Helix 86	86	D	267	287	Right-handed alpha
Helix 87	87	D	288	293	Right-handed alpha
Helix 88	88	D	306	321	Right-handed alpha
Helix 89	89	D	366	376	Right-handed alpha
Helix 90	90	D	394	398	Right-handed 310
Helix 91	91	D	505	510	Right-handed alpha
Helix 92	92	D	536	539	Right-handed 310
Helix 93	93	D	559	573	Right-handed alpha
Helix 94	94	D	602	614	Right-handed alpha
Helix 95	95	D	631	635	Right-handed 310
Helix 96	96	D	647	657	Right-handed alpha
Helix 97	97	D	673	677	Right-handed 310
Helix 98	98	D	699	707	Right-handed alpha
Helix 99	99	D	796	801	Right-handed alpha

There are 34 sheets in PDB entry 3ABZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	45	first strand
Strand 2	A	97	99	parallel

Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	148	first strand
Strand 2	A	188	191	parallel
Strand 3	A	221	223	parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	200	first strand
Strand 2	A	195	196	anti-parallel
Strand 3	A	161	163	parallel
Strand 4	A	689	691	parallel

Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	326	first strand
Strand 2	A	637	640	anti-parallel
Strand 3	A	617	622	parallel
Strand 4	A	576	582	parallel
Strand 5	A	339	342	parallel
Strand 6	A	380	382	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	413	418	anti-parallel
Strand 3	A	460	467	anti-parallel
Strand 4	A	527	534	anti-parallel
Strand 5	A	484	489	anti-parallel
Strand 6	A	492	497	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	441	443	first strand
Strand 2	A	549	556	anti-parallel
Strand 3	A	473	482	anti-parallel
Strand 4	A	515	521	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	723	732	first strand
Strand 2	A	736	745	anti-parallel
Strand 3	A	787	795	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	773	782	first strand
Strand 2	A	752	762	anti-parallel
Strand 3	A	815	822	anti-parallel
Strand 4	A	828	836	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	804	first strand
Strand 2	A	809	812	anti-parallel
Strand 3	A	840	842	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	45	first strand
Strand 2	B	97	99	parallel

Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	188	191	parallel
Strand 3	B	221	223	parallel

Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	195	196	anti-parallel
Strand 3	B	161	163	parallel
Strand 4	B	689	691	parallel

Back to list of sheets
Back to top of page

There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	326	first strand
Strand 2	B	637	640	anti-parallel
Strand 3	B	617	622	parallel
Strand 4	B	576	582	parallel
Strand 5	B	339	342	parallel
Strand 6	B	380	382	parallel

Back to list of sheets
Back to top of page

There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	437	first strand
Strand 2	B	413	418	anti-parallel
Strand 3	B	460	467	anti-parallel
Strand 4	B	527	534	anti-parallel
Strand 5	B	484	489	anti-parallel
Strand 6	B	492	495	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	441	442	first strand
Strand 2	B	550	556	anti-parallel
Strand 3	B	473	481	anti-parallel
Strand 4	B	515	521	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	723	732	first strand
Strand 2	B	736	745	anti-parallel
Strand 3	B	787	795	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	773	782	first strand
Strand 2	B	752	762	anti-parallel
Strand 3	B	815	822	anti-parallel
Strand 4	B	828	836	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	804	first strand
Strand 2	B	809	812	anti-parallel
Strand 3	B	840	842	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	97	98	parallel
Strand 3	C	142	148	parallel
Strand 4	C	188	191	parallel
Strand 5	C	221	223	parallel

Back to list of sheets
Back to top of page

There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	200	first strand
Strand 2	C	195	196	anti-parallel
Strand 3	C	161	163	parallel
Strand 4	C	689	691	parallel

Back to list of sheets
Back to top of page

There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	326	first strand
Strand 2	C	637	640	anti-parallel
Strand 3	C	618	622	parallel
Strand 4	C	576	582	parallel
Strand 5	C	339	342	parallel
Strand 6	C	380	382	parallel

Back to list of sheets
Back to top of page

There are 6 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	413	418	anti-parallel
Strand 3	C	460	467	anti-parallel
Strand 4	C	527	534	anti-parallel
Strand 5	C	484	489	anti-parallel
Strand 6	C	492	497	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	441	443	first strand
Strand 2	C	549	556	anti-parallel
Strand 3	C	473	482	anti-parallel
Strand 4	C	515	521	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	723	733	first strand
Strand 2	C	736	745	anti-parallel
Strand 3	C	787	794	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	773	782	first strand
Strand 2	C	752	762	anti-parallel
Strand 3	C	815	822	anti-parallel
Strand 4	C	828	836	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	802	804	first strand
Strand 2	C	809	812	anti-parallel
Strand 3	C	840	842	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	44	first strand
Strand 2	D	97	98	parallel
Strand 3	D	142	148	parallel
Strand 4	D	188	191	parallel
Strand 5	D	221	223	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	200	first strand
Strand 2	D	195	196	anti-parallel
Strand 3	D	161	163	parallel
Strand 4	D	689	691	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	322	326	first strand
Strand 2	D	637	640	anti-parallel
Strand 3	D	617	622	parallel
Strand 4	D	576	582	parallel
Strand 5	D	339	342	parallel
Strand 6	D	380	382	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	433	437	first strand
Strand 2	D	413	418	anti-parallel
Strand 3	D	460	467	anti-parallel
Strand 4	D	527	534	anti-parallel
Strand 5	D	484	489	anti-parallel
Strand 6	D	493	497	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	441	443	first strand
Strand 2	D	549	556	anti-parallel
Strand 3	D	473	482	anti-parallel
Strand 4	D	515	521	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	723	732	first strand
Strand 2	D	736	745	anti-parallel
Strand 3	D	787	795	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	773	782	first strand
Strand 2	D	752	762	anti-parallel
Strand 3	D	815	822	anti-parallel
Strand 4	D	828	836	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	802	804	first strand
Strand 2	D	809	812	anti-parallel
Strand 3	D	840	842	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ABZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ABZ