Analysis of interatomic Contacts of Structural Units in PDB entry:
3ADC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ADC entry

There are 4 chains in PDB entry 3ADC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS -1TYR 248
B
HIS -1TYR 248
C
G 1 A 76
D
G 1 A 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3ADC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 27Right-handed alpha
Helix 2
2
A
36 41Right-handed alpha
Helix 3
3
A
49 66Right-handed alpha
Helix 4
4
A
79 93Right-handed alpha
Helix 5
5
A
105 115Right-handed alpha
Helix 6
6
A
121 132Right-handed alpha
Helix 7
7
A
155 169Right-handed alpha
Helix 8
8
A
184 205Right-handed alpha
Helix 9
9
A
208 227Right-handed alpha
Helix 10
10
A
233 247Right-handed alpha
Helix 11
11
B
12 27Right-handed alpha
Helix 12
12
B
36 41Right-handed alpha
Helix 13
13
B
49 66Right-handed alpha
Helix 14
14
B
79 93Right-handed alpha
Helix 15
15
B
105 115Right-handed alpha
Helix 16
16
B
121 131Right-handed alpha
Helix 17
17
B
139 143Right-handed 310
Helix 18
18
B
155 169Right-handed alpha
Helix 19
19
B
185 206Right-handed alpha
Helix 20
20
B
208 227Right-handed alpha
Helix 21
21
B
233 247Right-handed alpha
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There are 2 sheets in PDB entry 3ADC. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 34first strand
Strand 2
A
70 73parallel
Strand 3
A
1 6parallel
Strand 4
A
96 103parallel
Strand 5
A
146 149parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
31 34first strand
Strand 2
B
70 73parallel
Strand 3
B
2 6parallel
Strand 4
B
97 103parallel
Strand 5
B
146 149parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il