Analysis of interatomic Contacts of Structural Units in PDB entry:
3ADP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ADP entry

There is 1 chain in PDB entry 3ADP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7MET 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3ADP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
38 59Right-handed alpha
Helix 3
3
A
67 74Right-handed alpha
Helix 4
4
A
80 85Right-handed alpha
Helix 5
5
A
98 111Right-handed alpha
Helix 6
6
A
127 133Right-handed alpha
Helix 7
7
A
137 139Right-handed 310
Helix 8
8
A
165 179Right-handed alpha
Helix 9
9
A
194 212Right-handed alpha
Helix 10
10
A
216 226Right-handed alpha
Helix 11
11
A
227 233Right-handed alpha
Helix 12
12
A
236 244Right-handed alpha
Helix 13
13
A
247 265Right-handed alpha
Helix 14
14
A
273 288Right-handed alpha
Helix 15
15
A
291 316Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3ADP.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
32 35parallel
Strand 3
A
8 12parallel
Strand 4
A
88 93parallel
Strand 5
A
118 121parallel
Strand 6
A
141 146parallel
Strand 7
A
155 160anti-parallel
Strand 8
A
182 185parallel
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