Analysis of interatomic Contacts of Structural Units in PDB entry:
3ADR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ADR entry

There are 2 chains in PDB entry 3ADR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2SER 260
B
 PRO 2SER 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3ADR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 19Right-handed 310
Helix 2
2
A
60 64Right-handed 310
Helix 3
3
A
66 74Right-handed alpha
Helix 4
4
A
85 90Right-handed alpha
Helix 5
5
A
90 106Right-handed alpha
Helix 6
6
A
106 113Right-handed alpha
Helix 7
7
A
120 122Right-handed 310
Helix 8
8
A
184 198Right-handed alpha
Helix 9
9
A
213 225Right-handed alpha
Helix 10
10
A
236 260Right-handed alpha
Helix 11
11
B
16 19Right-handed 310
Helix 12
12
B
60 64Right-handed 310
Helix 13
13
B
66 74Right-handed alpha
Helix 14
14
B
84 88Right-handed 310
Helix 15
15
B
90 106Right-handed alpha
Helix 16
16
B
107 113Right-handed alpha
Helix 17
17
B
120 122Right-handed 310
Helix 18
18
B
184 197Right-handed alpha
Helix 19
19
B
213 225Right-handed alpha
Helix 20
20
B
236 257Right-handed alpha
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There are 6 sheets in PDB entry 3ADR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
21 26anti-parallel
Strand 3
A
31 34anti-parallel
Strand 4
A
53 55parallel
Strand 5
A
77 81parallel
Strand 6
A
124 127parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
139 144anti-parallel
Strand 3
A
153 157anti-parallel
Strand 4
A
160 164anti-parallel
Strand 5
A
202 205parallel
Strand 6
A
209 211anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
174 176anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
21 26anti-parallel
Strand 3
B
31 34anti-parallel
Strand 4
B
53 55parallel
Strand 5
B
77 81parallel
Strand 6
B
124 127parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 134first strand
Strand 2
B
139 144anti-parallel
Strand 3
B
153 157anti-parallel
Strand 4
B
160 164anti-parallel
Strand 5
B
202 205parallel
Strand 6
B
209 211anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
174 176anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il