Analysis of interatomic Contacts of Structural Units in PDB entry:
3AGB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AGB entry

There are 2 chains in PDB entry 3AGB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 49LEU 319
B
 LYS 51VAL 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3AGB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 55Right-handed 310
Helix 2
2
A
59 77Right-handed alpha
Helix 3
3
A
87 91Right-handed alpha
Helix 4
4
A
178 186Right-handed alpha
Helix 5
5
A
190 200Right-handed alpha
Helix 6
6
A
211 218Right-handed alpha
Helix 7
7
A
231 242Right-handed alpha
Helix 8
8
A
242 258Right-handed alpha
Helix 9
9
A
269 292Right-handed alpha
Helix 10
10
A
295 301Right-handed alpha
Helix 11
11
A
301 317Right-handed alpha
Helix 12
12
B
59 78Right-handed alpha
Helix 13
13
B
79 81Right-handed 310
Helix 14
14
B
87 91Right-handed alpha
Helix 15
15
B
178 186Right-handed alpha
Helix 16
16
B
190 201Right-handed alpha
Helix 17
17
B
211 218Right-handed alpha
Helix 18
18
B
231 242Right-handed alpha
Helix 19
19
B
242 258Right-handed alpha
Helix 20
20
B
269 292Right-handed alpha
Helix 21
21
B
294 301Right-handed alpha
Helix 22
22
B
301 317Right-handed alpha
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There are 2 sheets in PDB entry 3AGB. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
100 108anti-parallel
Strand 3
A
115 126anti-parallel
Strand 4
A
132 142anti-parallel
Strand 5
A
151 157anti-parallel
Strand 6
A
162 168anti-parallel
Strand 7
A
223 228anti-parallel
Strand 8
A
204 206anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
100 108anti-parallel
Strand 3
B
115 126anti-parallel
Strand 4
B
132 142anti-parallel
Strand 5
B
151 159anti-parallel
Strand 6
B
162 168anti-parallel
Strand 7
B
223 228anti-parallel
Strand 8
B
204 206anti-parallel
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