Analysis of interatomic Contacts of Structural Units in PDB entry:
3AJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AJI entry

There are 6 chains in PDB entry 3AJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3GLY 84
A
 ASP 86MET 231
B
 MET 336LYS 408
C
 GLY 3GLY 84
C
 ASP 86MET 231
D
 MET 336LYS 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3AJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
18 29Right-handed alpha
Helix 3
3
A
30 35Right-handed 310
Helix 4
4
A
42 51Right-handed alpha
Helix 5
5
A
52 62Right-handed alpha
Helix 6
6
A
75 84Right-handed alpha
Helix 7
7
A
85 95Right-handed alpha
Helix 8
8
A
108 116Right-handed alpha
Helix 9
9
A
118 128Right-handed alpha
Helix 10
10
A
141 150Right-handed alpha
Helix 11
11
A
151 161Right-handed alpha
Helix 12
12
A
174 182Right-handed alpha
Helix 13
13
A
184 194Right-handed alpha
Helix 14
14
A
207 212Right-handed alpha
Helix 15
15
A
213 230Right-handed alpha
Helix 16
16
B
337 350Right-handed alpha
Helix 17
17
B
360 365Right-handed alpha
Helix 18
18
B
371 385Right-handed alpha
Helix 19
19
B
386 388Right-handed 310
Helix 20
20
B
395 407Right-handed alpha
Helix 21
21
C
8 16Right-handed alpha
Helix 22
22
C
18 29Right-handed alpha
Helix 23
23
C
30 35Right-handed 310
Helix 24
24
C
42 51Right-handed alpha
Helix 25
25
C
52 62Right-handed alpha
Helix 26
26
C
75 84Right-handed alpha
Helix 27
27
C
85 95Right-handed alpha
Helix 28
28
C
108 116Right-handed alpha
Helix 29
29
C
118 128Right-handed alpha
Helix 30
30
C
141 150Right-handed alpha
Helix 31
31
C
151 161Right-handed alpha
Helix 32
32
C
174 182Right-handed alpha
Helix 33
33
C
184 194Right-handed alpha
Helix 34
34
C
207 212Right-handed alpha
Helix 35
35
C
213 230Right-handed alpha
Helix 36
36
D
337 350Right-handed alpha
Helix 37
37
D
360 365Right-handed alpha
Helix 38
38
D
371 388Right-handed alpha
Helix 39
39
D
395 407Right-handed alpha
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There are no sheets in PDB entry 3AJI
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