Analysis of interatomic Contacts of Structural Units in PDB entry:
3AKN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AKN entry

There is 1 chain in PDB entry 3AKN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LYS 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 3AKN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 21Right-handed alpha
Helix 2
2
A
24 32Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3AKN.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
46 52anti-parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
4 12anti-parallel
Strand 5
A
122 129anti-parallel
Strand 6
A
112 119anti-parallel
Strand 7
A
101 109anti-parallel
Strand 8
A
88 95anti-parallel
Strand 9
A
77 85anti-parallel
Strand 10
A
68 71anti-parallel
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