Analysis of interatomic Contacts of Structural Units in PDB entry:
3AOB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3AOB entry

There are 3 chains in PDB entry 3AOB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 1036
B	MET 1	LYS 1036
C	MET 1	LYS 1036

There are137 helices in PDB entry 3AOB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	28	Right-handed alpha
Helix 2	2	A	53	61	Right-handed alpha
Helix 3	3	A	61	68	Right-handed alpha
Helix 4	4	A	99	115	Right-handed alpha
Helix 5	5	A	116	118	Right-handed 310
Helix 6	6	A	119	126	Right-handed alpha
Helix 7	7	A	150	162	Right-handed alpha
Helix 8	8	A	162	168	Right-handed alpha
Helix 9	9	A	190	195	Right-handed alpha
Helix 10	10	A	199	211	Right-handed alpha
Helix 11	11	A	242	248	Right-handed alpha
Helix 12	12	A	300	313	Right-handed alpha
Helix 13	13	A	330	339	Right-handed alpha
Helix 14	14	A	340	360	Right-handed alpha
Helix 15	15	A	361	366	Right-handed alpha
Helix 16	16	A	367	385	Right-handed alpha
Helix 17	17	A	391	400	Right-handed alpha
Helix 18	18	A	401	407	Right-handed alpha
Helix 19	19	A	408	419	Right-handed alpha
Helix 20	20	A	426	438	Right-handed alpha
Helix 21	21	A	438	451	Right-handed alpha
Helix 22	22	A	453	457	Right-handed 310
Helix 23	23	A	461	485	Right-handed alpha
Helix 24	24	A	488	494	Right-handed alpha
Helix 25	25	A	516	533	Right-handed alpha
Helix 26	26	A	541	559	Right-handed alpha
Helix 27	27	A	583	601	Right-handed alpha
Helix 28	28	A	639	642	Right-handed 310
Helix 29	29	A	643	656	Right-handed alpha
Helix 30	30	A	691	708	Right-handed alpha
Helix 31	31	A	732	739	Right-handed alpha
Helix 32	32	A	742	755	Right-handed alpha
Helix 33	33	A	776	780	Right-handed 310
Helix 34	34	A	782	788	Right-handed 310
Helix 35	35	A	802	804	Right-handed 310
Helix 36	36	A	836	850	Right-handed alpha
Helix 37	37	A	861	870	Right-handed alpha
Helix 38	38	A	872	892	Right-handed alpha
Helix 39	39	A	898	903	Right-handed alpha
Helix 40	40	A	904	913	Right-handed alpha
Helix 41	41	A	914	916	Right-handed 310
Helix 42	42	A	924	955	Right-handed alpha
Helix 43	43	A	961	969	Right-handed alpha
Helix 44	44	A	971	987	Right-handed alpha
Helix 45	45	A	998	1016	Right-handed alpha
Helix 46	46	A	1017	1032	Right-handed alpha
Helix 47	47	B	8	29	Right-handed alpha
Helix 48	48	B	54	59	Right-handed alpha
Helix 49	49	B	61	68	Right-handed alpha
Helix 50	50	B	99	115	Right-handed alpha
Helix 51	51	B	116	118	Right-handed 310
Helix 52	52	B	119	124	Right-handed alpha
Helix 53	53	B	150	162	Right-handed alpha
Helix 54	54	B	162	167	Right-handed alpha
Helix 55	55	B	189	197	Right-handed alpha
Helix 56	56	B	199	211	Right-handed alpha
Helix 57	57	B	242	248	Right-handed alpha
Helix 58	58	B	300	314	Right-handed alpha
Helix 59	59	B	330	357	Right-handed alpha
Helix 60	60	B	361	366	Right-handed alpha
Helix 61	61	B	371	387	Right-handed alpha
Helix 62	62	B	391	401	Right-handed alpha
Helix 63	63	B	402	404	Right-handed 310
Helix 64	64	B	406	418	Right-handed alpha
Helix 65	65	B	427	452	Right-handed alpha
Helix 66	66	B	453	458	Right-handed alpha
Helix 67	67	B	460	485	Right-handed alpha
Helix 68	68	B	487	494	Right-handed alpha
Helix 69	69	B	519	521	Right-handed 310
Helix 70	70	B	522	537	Right-handed alpha
Helix 71	71	B	544	557	Right-handed alpha
Helix 72	72	B	583	598	Right-handed alpha
Helix 73	73	B	639	642	Right-handed 310
Helix 74	74	B	643	655	Right-handed alpha
Helix 75	75	B	656	658	Right-handed 310
Helix 76	76	B	733	738	Right-handed alpha
Helix 77	77	B	742	756	Right-handed alpha
Helix 78	78	B	784	788	Right-handed 310
Helix 79	79	B	802	804	Right-handed 310
Helix 80	80	B	836	849	Right-handed alpha
Helix 81	81	B	860	872	Right-handed alpha
Helix 82	82	B	872	892	Right-handed alpha
Helix 83	83	B	896	902	Right-handed alpha
Helix 84	84	B	904	918	Right-handed alpha
Helix 85	85	B	924	950	Right-handed alpha
Helix 86	86	B	961	971	Right-handed alpha
Helix 87	87	B	972	984	Right-handed alpha
Helix 88	88	B	986	992	Right-handed alpha
Helix 89	89	B	999	1005	Right-handed alpha
Helix 90	90	B	1008	1013	Right-handed alpha
Helix 91	91	B	1015	1020	Right-handed alpha
Helix 92	92	B	1021	1033	Right-handed alpha
Helix 93	93	C	2	8	Right-handed alpha
Helix 94	94	C	8	30	Right-handed alpha
Helix 95	95	C	54	61	Right-handed alpha
Helix 96	96	C	61	69	Right-handed alpha
Helix 97	97	C	99	115	Right-handed alpha
Helix 98	98	C	116	118	Right-handed 310
Helix 99	99	C	119	126	Right-handed alpha
Helix 100	100	C	150	162	Right-handed alpha
Helix 101	101	C	162	169	Right-handed alpha
Helix 102	102	C	189	196	Right-handed alpha
Helix 103	103	C	199	211	Right-handed alpha
Helix 104	104	C	242	248	Right-handed alpha
Helix 105	105	C	298	312	Right-handed alpha
Helix 106	106	C	329	354	Right-handed alpha
Helix 107	107	C	372	387	Right-handed alpha
Helix 108	108	C	391	413	Right-handed alpha
Helix 109	109	C	414	419	Right-handed alpha
Helix 110	110	C	427	437	Right-handed alpha
Helix 111	111	C	438	454	Right-handed alpha
Helix 112	112	C	466	476	Right-handed alpha
Helix 113	113	C	479	486	Right-handed alpha
Helix 114	114	C	487	493	Right-handed alpha
Helix 115	115	C	518	531	Right-handed alpha
Helix 116	116	C	543	558	Right-handed alpha
Helix 117	117	C	583	600	Right-handed alpha
Helix 118	118	C	633	637	Right-handed 310
Helix 119	119	C	643	655	Right-handed alpha
Helix 120	120	C	691	707	Right-handed alpha
Helix 121	121	C	732	740	Right-handed alpha
Helix 122	122	C	742	754	Right-handed alpha
Helix 123	123	C	777	780	Right-handed 310
Helix 124	124	C	782	786	Right-handed 310
Helix 125	125	C	836	848	Right-handed alpha
Helix 126	126	C	861	865	Right-handed 310
Helix 127	127	C	872	875	Right-handed 310
Helix 128	128	C	876	892	Right-handed alpha
Helix 129	129	C	897	903	Right-handed 310
Helix 130	130	C	904	913	Right-handed alpha
Helix 131	131	C	926	944	Right-handed alpha
Helix 132	132	C	944	955	Right-handed alpha
Helix 133	133	C	963	971	Right-handed alpha
Helix 134	134	C	972	991	Right-handed alpha
Helix 135	135	C	996	1005	Right-handed alpha
Helix 136	136	C	1007	1017	Right-handed alpha
Helix 137	137	C	1020	1033	Right-handed alpha

There are 26 sheets in PDB entry 3AOB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	130	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	815	819	anti-parallel
Strand 6	A	822	829	anti-parallel
Strand 7	A	717	718	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	130	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	815	819	anti-parallel
Strand 6	A	822	829	anti-parallel
Strand 7	A	680	686	anti-parallel
Strand 8	A	855	859	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	175	first strand
Strand 2	A	289	292	anti-parallel
Strand 3	A	136	144	anti-parallel
Strand 4	A	321	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	271	272	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	188	first strand
Strand 2	A	266	267	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	254	first strand
Strand 2	A	258	261	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	285	first strand
Strand 2	A	278	281	anti-parallel
Strand 3	A	606	613	anti-parallel
Strand 4	A	625	631	anti-parallel
Strand 5	A	571	577	anti-parallel
Strand 6	A	662	666	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	808	812	first strand
Strand 2	A	724	728	anti-parallel
Strand 3	C	233	235	parallel
Strand 4	C	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	757	764	first strand
Strand 2	A	767	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	790	792	first strand
Strand 2	A	798	800	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	82	anti-parallel
Strand 5	B	816	819	anti-parallel
Strand 6	B	822	827	anti-parallel
Strand 7	B	682	686	anti-parallel
Strand 8	B	855	859	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	178	first strand
Strand 2	B	284	293	anti-parallel
Strand 3	B	141	144	anti-parallel
Strand 4	B	321	324	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	178	first strand
Strand 2	B	284	293	anti-parallel
Strand 3	B	279	281	anti-parallel
Strand 4	B	606	612	anti-parallel
Strand 5	B	624	631	anti-parallel
Strand 6	B	571	577	anti-parallel
Strand 7	B	662	664	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	268	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	271	272	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	268	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	767	775	parallel
Strand 4	B	758	764	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	219	first strand
Strand 2	B	232	235	anti-parallel
Strand 3	C	724	729	parallel
Strand 4	C	807	812	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	253	first strand
Strand 2	B	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	724	726	first strand
Strand 2	B	810	812	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	790	792	first strand
Strand 2	B	798	800	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	48	first strand
Strand 2	C	87	94	anti-parallel
Strand 3	C	75	83	anti-parallel
Strand 4	C	815	819	anti-parallel
Strand 5	C	822	823	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	177	first strand
Strand 2	C	287	292	anti-parallel
Strand 3	C	138	144	anti-parallel
Strand 4	C	321	324	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	767	775	parallel
Strand 4	C	757	764	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	285	first strand
Strand 2	C	278	281	anti-parallel
Strand 3	C	606	616	anti-parallel
Strand 4	C	619	631	anti-parallel
Strand 5	C	571	576	anti-parallel
Strand 6	C	665	666	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	718	first strand
Strand 2	C	826	829	anti-parallel
Strand 3	C	680	686	anti-parallel
Strand 4	C	855	859	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	790	792	first strand
Strand 2	C	798	800	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3AOB

Analysis of interatomic Contacts of Structural Units in PDB entry:
3AOB