Analysis of interatomic Contacts of Structural Units in PDB entry:
3APZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3APZ entry

There are 2 chains in PDB entry 3APZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8LYS 348
B
 ASP 9LYS 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3APZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 24Right-handed alpha
Helix 2
2
A
25 28Right-handed 310
Helix 3
3
A
48 63Right-handed alpha
Helix 4
4
A
82 109Right-handed alpha
Helix 5
5
A
127 149Right-handed alpha
Helix 6
6
A
151 174Right-handed alpha
Helix 7
7
A
176 181Right-handed alpha
Helix 8
8
A
182 195Right-handed alpha
Helix 9
9
A
195 208Right-handed alpha
Helix 10
10
A
212 241Right-handed alpha
Helix 11
11
A
251 256Right-handed alpha
Helix 12
12
A
260 270Right-handed alpha
Helix 13
13
A
272 279Right-handed alpha
Helix 14
14
A
284 297Right-handed alpha
Helix 15
15
A
298 319Right-handed alpha
Helix 16
16
A
326 346Right-handed alpha
Helix 17
17
B
11 13Right-handed 310
Helix 18
18
B
14 24Right-handed alpha
Helix 19
19
B
25 28Right-handed 310
Helix 20
20
B
47 64Right-handed alpha
Helix 21
21
B
82 110Right-handed alpha
Helix 22
22
B
128 148Right-handed alpha
Helix 23
23
B
151 175Right-handed alpha
Helix 24
24
B
176 181Right-handed alpha
Helix 25
25
B
182 195Right-handed alpha
Helix 26
26
B
195 208Right-handed alpha
Helix 27
27
B
212 241Right-handed alpha
Helix 28
28
B
253 257Right-handed 310
Helix 29
29
B
260 270Right-handed alpha
Helix 30
30
B
272 280Right-handed alpha
Helix 31
31
B
284 297Right-handed alpha
Helix 32
32
B
298 321Right-handed alpha
Helix 33
33
B
326 346Right-handed alpha
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There are no sheets in PDB entry 3APZ
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