Analysis of interatomic Contacts of Structural Units in PDB entry:
3ASV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ASV entry

There are 6 chains in PDB entry 3ASV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 248
B
 MET 1GLN 248
C
 MET 1GLN 248
D
 MET 1GLN 248
E
 MET 1GLN 248
F
 MET 1GLN 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3ASV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 22Right-handed alpha
Helix 2
2
A
33 45Right-handed alpha
Helix 3
3
A
57 68Right-handed alpha
Helix 4
4
A
90 94Right-handed 310
Helix 5
5
A
95 107Right-handed alpha
Helix 6
6
A
107 124Right-handed alpha
Helix 7
7
A
134 138Right-handed 310
Helix 8
8
A
144 165Right-handed alpha
Helix 9
9
A
184 190Right-handed alpha
Helix 10
10
A
193 202Right-handed alpha
Helix 11
11
A
208 221Right-handed alpha
Helix 12
12
B
10 23Right-handed alpha
Helix 13
13
B
33 45Right-handed alpha
Helix 14
14
B
57 68Right-handed alpha
Helix 15
15
B
69 74Right-handed alpha
Helix 16
16
B
90 94Right-handed 310
Helix 17
17
B
95 107Right-handed alpha
Helix 18
18
B
107 124Right-handed alpha
Helix 19
19
B
134 138Right-handed 310
Helix 20
20
B
144 166Right-handed alpha
Helix 21
21
B
184 190Right-handed alpha
Helix 22
22
B
193 202Right-handed alpha
Helix 23
23
B
208 221Right-handed alpha
Helix 24
24
C
10 23Right-handed alpha
Helix 25
25
C
33 45Right-handed alpha
Helix 26
26
C
57 68Right-handed alpha
Helix 27
27
C
69 73Right-handed 310
Helix 28
28
C
90 94Right-handed 310
Helix 29
29
C
95 107Right-handed alpha
Helix 30
30
C
107 125Right-handed alpha
Helix 31
31
C
134 138Right-handed 310
Helix 32
32
C
144 165Right-handed alpha
Helix 33
33
C
184 190Right-handed alpha
Helix 34
34
C
193 202Right-handed alpha
Helix 35
35
C
208 222Right-handed alpha
Helix 36
36
D
10 23Right-handed alpha
Helix 37
37
D
33 45Right-handed alpha
Helix 38
38
D
57 67Right-handed alpha
Helix 39
39
D
69 73Right-handed 310
Helix 40
40
D
90 94Right-handed 310
Helix 41
41
D
95 107Right-handed alpha
Helix 42
42
D
107 124Right-handed alpha
Helix 43
43
D
134 138Right-handed 310
Helix 44
44
D
144 165Right-handed alpha
Helix 45
45
D
184 190Right-handed alpha
Helix 46
46
D
193 200Right-handed alpha
Helix 47
47
D
208 221Right-handed alpha
Helix 48
48
E
10 22Right-handed alpha
Helix 49
49
E
33 45Right-handed alpha
Helix 50
50
E
57 67Right-handed alpha
Helix 51
51
E
69 74Right-handed alpha
Helix 52
52
E
90 94Right-handed 310
Helix 53
53
E
95 107Right-handed alpha
Helix 54
54
E
107 124Right-handed alpha
Helix 55
55
E
134 138Right-handed 310
Helix 56
56
E
144 165Right-handed alpha
Helix 57
57
E
184 190Right-handed alpha
Helix 58
58
E
193 202Right-handed alpha
Helix 59
59
E
208 221Right-handed alpha
Helix 60
60
F
10 23Right-handed alpha
Helix 61
61
F
33 45Right-handed alpha
Helix 62
62
F
57 68Right-handed alpha
Helix 63
63
F
69 74Right-handed alpha
Helix 64
64
F
90 94Right-handed 310
Helix 65
65
F
95 107Right-handed alpha
Helix 66
66
F
107 124Right-handed alpha
Helix 67
67
F
134 138Right-handed 310
Helix 68
68
F
144 166Right-handed alpha
Helix 69
69
F
184 190Right-handed alpha
Helix 70
70
F
193 202Right-handed alpha
Helix 71
71
F
208 221Right-handed alpha
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There are 8 sheets in PDB entry 3ASV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
26 31parallel
Strand 3
A
2 5parallel
Strand 4
A
77 80parallel
Strand 5
A
128 132parallel
Strand 6
A
171 177parallel
Strand 7
A
230 233parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
26 31parallel
Strand 3
B
2 6parallel
Strand 4
B
77 80parallel
Strand 5
B
128 132parallel
Strand 6
B
171 177parallel
Strand 7
B
230 233parallel
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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 52first strand
Strand 2
C
26 31parallel
Strand 3
C
2 5parallel
Strand 4
C
77 79parallel
Strand 5
C
128 132parallel
Strand 6
C
171 177parallel
Strand 7
C
226 235parallel
Strand 8
F
226 235anti-parallel
Strand 9
F
171 177parallel
Strand 10
F
128 132parallel
Strand 11
F
77 80parallel
Strand 12
F
2 5parallel
Strand 13
F
26 31parallel
Strand 14
F
48 52parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 240first strand
Strand 2
E
243 245anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
243 245first strand
Strand 2
E
238 240anti-parallel
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There are 14 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 50first strand
Strand 2
D
26 30parallel
Strand 3
D
2 6parallel
Strand 4
D
77 80parallel
Strand 5
D
128 132parallel
Strand 6
D
171 177parallel
Strand 7
D
226 235parallel
Strand 8
E
226 235anti-parallel
Strand 9
E
171 177parallel
Strand 10
E
128 132parallel
Strand 11
E
77 80parallel
Strand 12
E
2 5parallel
Strand 13
E
26 31parallel
Strand 14
E
48 52parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
238 240first strand
Strand 2
F
243 245anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
243 245first strand
Strand 2
F
238 240anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il