Analysis of interatomic Contacts of Structural Units in PDB entry:
3AU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AU6 entry

There are 3 chains in PDB entry 3AU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 571
P
 C 1 T 6
T
 G 2 G 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 3AU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 21Right-handed alpha
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
43 49Right-handed alpha
Helix 4
4
A
62 74Right-handed alpha
Helix 5
5
A
78 88Right-handed alpha
Helix 6
6
A
89 97Right-handed alpha
Helix 7
7
A
102 114Right-handed alpha
Helix 8
8
A
117 126Right-handed alpha
Helix 9
9
A
137 155Right-handed alpha
Helix 10
10
A
163 176Right-handed alpha
Helix 11
11
A
186 191Right-handed alpha
Helix 12
12
A
210 216Right-handed alpha
Helix 13
13
A
248 250Right-handed 310
Helix 14
14
A
251 261Right-handed alpha
Helix 15
15
A
262 276Right-handed alpha
Helix 16
16
A
296 304Right-handed alpha
Helix 17
17
A
310 314Right-handed 310
Helix 18
18
A
318 324Right-handed alpha
Helix 19
19
A
333 337Right-handed 310
Helix 20
20
A
353 365Right-handed alpha
Helix 21
21
A
385 401Right-handed alpha
Helix 22
22
A
425 430Right-handed alpha
Helix 23
23
A
446 458Right-handed alpha
Helix 24
24
A
483 493Right-handed alpha
Helix 25
25
A
510 519Right-handed alpha
Helix 26
26
A
532 537Right-handed 310
Helix 27
27
A
538 549Right-handed alpha
Helix 28
28
A
556 560Right-handed 310
Helix 29
29
A
561 571Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 3AU6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
195 196anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
241 245parallel
Strand 3
A
231 236anti-parallel
Strand 4
A
221 226anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
285 287anti-parallel
Strand 3
A
290 293anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 340first strand
Strand 2
A
368 370parallel
Strand 3
A
407 409parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
411 414parallel
Strand 3
A
434 437parallel
Strand 4
A
465 466parallel
Strand 5
A
497 501parallel
Strand 6
A
524 527parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il