Analysis of interatomic Contacts of Structural Units in PDB entry:
3AU8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AU8 entry

There are 2 chains in PDB entry 3AU8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 77LYS 484
B
 PRO 77LYS 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3AU8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
87 104Right-handed alpha
Helix 2
2
A
117 129Right-handed alpha
Helix 3
3
A
137 140Right-handed 310
Helix 4
4
A
141 146Right-handed alpha
Helix 5
5
A
147 151Right-handed 310
Helix 6
6
A
161 171Right-handed alpha
Helix 7
7
A
182 196Right-handed alpha
Helix 8
8
A
205 222Right-handed alpha
Helix 9
9
A
231 241Right-handed alpha
Helix 10
10
A
242 247Right-handed alpha
Helix 11
11
A
255 260Right-handed alpha
Helix 12
12
A
278 283Right-handed alpha
Helix 13
13
A
300 308Right-handed alpha
Helix 14
14
A
309 324Right-handed alpha
Helix 15
15
A
326 328Right-handed 310
Helix 16
16
A
360 370Right-handed alpha
Helix 17
17
A
382 387Right-handed alpha
Helix 18
18
A
399 412Right-handed alpha
Helix 19
19
A
414 432Right-handed alpha
Helix 20
20
A
436 451Right-handed alpha
Helix 21
21
A
459 484Right-handed alpha
Helix 22
22
B
87 104Right-handed alpha
Helix 23
23
B
117 129Right-handed alpha
Helix 24
24
B
137 139Right-handed 310
Helix 25
25
B
140 149Right-handed alpha
Helix 26
26
B
161 171Right-handed alpha
Helix 27
27
B
183 196Right-handed alpha
Helix 28
28
B
205 222Right-handed alpha
Helix 29
29
B
231 241Right-handed alpha
Helix 30
30
B
242 247Right-handed alpha
Helix 31
31
B
255 260Right-handed alpha
Helix 32
32
B
278 285Right-handed alpha
Helix 33
33
B
286 293Right-handed alpha
Helix 34
34
B
300 308Right-handed alpha
Helix 35
35
B
309 324Right-handed alpha
Helix 36
36
B
326 328Right-handed 310
Helix 37
37
B
360 370Right-handed alpha
Helix 38
38
B
382 387Right-handed alpha
Helix 39
39
B
399 412Right-handed alpha
Helix 40
40
B
414 432Right-handed alpha
Helix 41
41
B
436 451Right-handed alpha
Helix 42
42
B
459 484Right-handed alpha
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There are 4 sheets in PDB entry 3AU8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 160first strand
Strand 2
A
132 135parallel
Strand 3
A
107 114parallel
Strand 4
A
78 83parallel
Strand 5
A
176 179parallel
Strand 6
A
199 202parallel
Strand 7
A
226 229parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 334first strand
Strand 2
A
262 269parallel
Strand 3
A
340 346anti-parallel
Strand 4
A
351 355anti-parallel
Strand 5
B
351 355anti-parallel
Strand 6
B
340 346anti-parallel
Strand 7
B
262 269anti-parallel
Strand 8
B
330 334parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 390first strand
Strand 2
B
388 390anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 160first strand
Strand 2
B
132 135parallel
Strand 3
B
107 114parallel
Strand 4
B
78 83parallel
Strand 5
B
176 179parallel
Strand 6
B
199 202parallel
Strand 7
B
226 229parallel
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